Gene mRNA_4907 in Rhodosporidium toruloides IFO0880

mRNA_4907 13275: HMMPfam-Cytochrome c oxidase subunit VIIc-PF02935,SUPERFAMILY--SSF81427 in Rhodosporidium toruloides IFO0880

Type 1: Protein-coding gene
Located on scaffold scaffold_3, + strand, nucleotides 1,274,592 to 1,274,946

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_4902: 13270 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1263087 to 1265892 13270 mRNA_4903: 13271 - BLAST topoisomerase i [Xanthophyllomyces dendrorhous], at 1266011 to 1266275 13271 mRNA_4904: 13272 - K00367 narB ferredoxin-nitrate reductase, at 1266419 to 1270865 13272 mRNA_4905: 13273 - KOG2371 Molybdopterin biosynthesis protein, at 1271158 to 1273410 13273 mRNA_4906: 13274 - K03540 RPR2, RPP21 ribonuclease P protein subunit RPR2, at 1273469 to 1274303 13274 mRNA_4907: 13275 - HMMPfam-Cytochrome c oxidase subunit VIIc-PF02935,SUPERFAMILY--SSF81427, at 1274592 to 1274946 13275 mRNA_4908: 13276 - K15163 SRB8, MED12 mediator of RNA polymerase II transcription subunit 12, fungi type, at 1275228 to 1281484 13276 mRNA_4909: 13277 - KOG1339 Aspartyl protease, at 1281980 to 1284451 13277 mRNA_4910: 13278 - K14555 UTP13, TBL3 U3 small nucleolar RNA-associated protein 13, at 1284802 to 1288001 13278 mRNA_4911: 13279 - BLAST pre-mrna-splicing factor cwc22 [Moniliophthora ro..., at 1288302 to 1289594 13279 mRNA_4912: 13280 - KOG3309 Ferredoxin, at 1289654 to 1291365 13280
Locus Name Description Strand Distance (nt) Phenotype
mRNA_4902 13270 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + cofit
mRNA_4903 13271 BLAST topoisomerase i [Xanthophyllomyces dendrorhous] - 119 no data
mRNA_4904 13272 K00367 narB ferredoxin-nitrate reductase - 144 cofit
mRNA_4905 13273 KOG2371 Molybdopterin biosynthesis protein + 293 insig.
mRNA_4906 13274 K03540 RPR2, RPP21 ribonuclease P protein subunit RPR2 - 59 no data
mRNA_4907 13275 HMMPfam-Cytochrome c oxidase subunit VIIc-PF02935,SUPERFAMILY--SSF81427 + 289 no data
mRNA_4908 13276 K15163 SRB8, MED12 mediator of RNA polymerase II transcription subunit 12, fungi type - 282 cofit
mRNA_4909 13277 KOG1339 Aspartyl protease + 496 cofit
mRNA_4910 13278 K14555 UTP13, TBL3 U3 small nucleolar RNA-associated protein 13 - 351 cofit
mRNA_4911 13279 BLAST pre-mrna-splicing factor cwc22 [Moniliophthora ro... + 301 cofit
mRNA_4912 13280 KOG3309 Ferredoxin - 60 cofit