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Gene mRNA_4906 in
Rhodosporidium toruloides IFO0880
mRNA_4906 13274: K03540 RPR2, RPP21 ribonuclease P protein subunit RPR2 in Rhodosporidium toruloides IFO0880
Type 1: Protein-coding gene
Located on scaffold scaffold_3, - strand, nucleotides 1,273,469 to 1,274,303
Links:
MicrobesOnline
Nearby Genes
500 nt
mRNA_4901: 13269 - K03163 TOP1 DNA topoisomerase I, at 1259473 to 1262647
13269
mRNA_4902: 13270 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1263087 to 1265892
13270
mRNA_4903: 13271 - BLAST topoisomerase i [Xanthophyllomyces dendrorhous], at 1266011 to 1266275
13271
mRNA_4904: 13272 - K00367 narB ferredoxin-nitrate reductase, at 1266419 to 1270865
13272
mRNA_4905: 13273 - KOG2371 Molybdopterin biosynthesis protein, at 1271158 to 1273410
13273
mRNA_4906: 13274 - K03540 RPR2, RPP21 ribonuclease P protein subunit RPR2, at 1273469 to 1274303
13274
mRNA_4907: 13275 - HMMPfam-Cytochrome c oxidase subunit VIIc-PF02935,SUPERFAMILY--SSF81427, at 1274592 to 1274946
13275
mRNA_4908: 13276 - K15163 SRB8, MED12 mediator of RNA polymerase II transcription subunit 12, fungi type, at 1275228 to 1281484
13276
mRNA_4909: 13277 - KOG1339 Aspartyl protease, at 1281980 to 1284451
13277
mRNA_4910: 13278 - K14555 UTP13, TBL3 U3 small nucleolar RNA-associated protein 13, at 1284802 to 1288001
13278
mRNA_4911: 13279 - BLAST pre-mrna-splicing factor cwc22 [Moniliophthora ro..., at 1288302 to 1289594
13279
Locus
Name
Description
Strand
Distance (nt)
Phenotype
mRNA_4901
13269
K03163 TOP1 DNA topoisomerase I
+
no data
mRNA_4902
13270
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
+
440
cofit
mRNA_4903
13271
BLAST topoisomerase i [Xanthophyllomyces dendrorhous]
-
119
no data
mRNA_4904
13272
K00367 narB ferredoxin-nitrate reductase
-
144
cofit
mRNA_4905
13273
KOG2371 Molybdopterin biosynthesis protein
+
293
insig.
mRNA_4906
13274
K03540 RPR2, RPP21 ribonuclease P protein subunit RPR2
-
59
no data
mRNA_4907
13275
HMMPfam-Cytochrome c oxidase subunit VIIc-PF02935,SUPERFAMILY--SSF81427
+
289
no data
mRNA_4908
13276
K15163 SRB8, MED12 mediator of RNA polymerase II transcription subunit 12, fungi type
-
282
cofit
mRNA_4909
13277
KOG1339 Aspartyl protease
+
496
cofit
mRNA_4910
13278
K14555 UTP13, TBL3 U3 small nucleolar RNA-associated protein 13
-
351
cofit
mRNA_4911
13279
BLAST pre-mrna-splicing factor cwc22 [Moniliophthora ro...
+
301
cofit