Gene info for mRNA_4602 in Rhodosporidium toruloides IFO0880

mRNA_4602 12970: HMMPfam-NYN domain-PF01936

Type 1: Protein-coding gene
Located on scaffold scaffold_3, - strand, nucleotides 561,866 to 562,949

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_4597: 12965 - K01836 PGM3 phosphoacetylglucosamine mutase, at 551838 to 553839 12965 mRNA_4598: 12966 - K00418 QCR8, UQCRQ ubiquinol-cytochrome c reductase subunit 8, at 554421 to 554905 12966 mRNA_4599: 12967 - K12820 DHX15, PRP43 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43, at 554983 to 558487 12967 mRNA_4600: 12968 - K08343 ATG3 ubiquitin-like-conjugating enzyme ATG3, at 558585 to 560759 12968 mRNA_4601: 12969 - HMMPfam-Sen15 protein-PF09631,SUPERFAMILY--SSF53032, at 560875 to 561580 12969 mRNA_4602: 12970 - HMMPfam-NYN domain-PF01936, at 561866 to 562949 12970 mRNA_4603: 12971 - K07119 K07119 uncharacterized protein, at 563356 to 565108 12971 mRNA_4604: 12972 - K10747 LIG1 DNA ligase 1, at 565709 to 567987 12972 mRNA_4605: 12973 - KOG0254 Predicted transporter (major facilitator superfamily), at 568226 to 569633 12973 mRNA_4606: 12974 - HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,ProSitePatterns-Zinc-containing alcohol dehydrogenases signature.-PS00059,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 569895 to 571183 12974 mRNA_4607: 12975 - BLAST TrfA domain protein, putative [Rhizoctonia solani AG-..., at 571268 to 571973 12975
Locus Name Description Strand Distance (nt) Phenotype
mRNA_4597 12965 K01836 PGM3 phosphoacetylglucosamine mutase + no data
mRNA_4598 12966 K00418 QCR8, UQCRQ ubiquinol-cytochrome c reductase subunit 8 + 582 no data
mRNA_4599 12967 K12820 DHX15, PRP43 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 - 78 no data
mRNA_4600 12968 K08343 ATG3 ubiquitin-like-conjugating enzyme ATG3 - 98 strong
mRNA_4601 12969 HMMPfam-Sen15 protein-PF09631,SUPERFAMILY--SSF53032 + 116 no data
mRNA_4602 12970 HMMPfam-NYN domain-PF01936 - 286 cofit
mRNA_4603 12971 K07119 K07119 uncharacterized protein - 407 cofit
mRNA_4604 12972 K10747 LIG1 DNA ligase 1 - 601 no data
mRNA_4605 12973 KOG0254 Predicted transporter (major facilitator superfamily) - 239 cofit
mRNA_4606 12974 HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,ProSitePatterns-Zinc-containing alcohol dehydrogenases signature.-PS00059,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735 - 262 cofit
mRNA_4607 12975 BLAST TrfA domain protein, putative [Rhizoctonia solani AG-... - 85 cofit