Gene info for mRNA_4566 in Rhodosporidium toruloides IFO0880

mRNA_4566 12934: KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins

Type 1: Protein-coding gene
Located on scaffold scaffold_3, - strand, nucleotides 479,407 to 483,783

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_4561: 12929 - K06990 MEMO1 MEMO1 family protein, at 464488 to 466003 12929 mRNA_4562: 12930 - K11366 USP22_27_51, UBP8 ubiquitin carboxyl-terminal hydrolase 22/27/51, at 466499 to 468748 12930 mRNA_4563: 12931 - KOG1601 GATA-4/5/6 transcription factors, at 469300 to 472637 12931 mRNA_4564: 12932 - K11844 USP16_45 ubiquitin carboxyl-terminal hydrolase 16/45, at 473313 to 477203 12932 mRNA_4565: 12933 - KOG2793 Putative N2,N2-dimethylguanosine tRNA methyltransferase, at 477682 to 479259 12933 mRNA_4566: 12934 - KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins, at 479407 to 483783 12934 mRNA_4567: 12935 - K10743 RNASEH2A ribonuclease H2 subunit A, at 484052 to 485585 12935 mRNA_4568: 12936 - Hypothetical Protein, at 485805 to 489325 12936 mRNA_4569: 12937 - HMMPfam-Integral peroxisomal membrane peroxin-PF06398, at 489481 to 490955 12937 mRNA_4570: 12938 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 491173 to 492372 12938 mRNA_4571: 12939 - KOG4419 5' nucleotidase, at 493411 to 495654 12939
Locus Name Description Strand Distance (nt) Phenotype
mRNA_4561 12929 K06990 MEMO1 MEMO1 family protein - cofit
mRNA_4562 12930 K11366 USP22_27_51, UBP8 ubiquitin carboxyl-terminal hydrolase 22/27/51 + 496 cofit
mRNA_4563 12931 KOG1601 GATA-4/5/6 transcription factors - 552 insig.
mRNA_4564 12932 K11844 USP16_45 ubiquitin carboxyl-terminal hydrolase 16/45 - 676 cofit
mRNA_4565 12933 KOG2793 Putative N2,N2-dimethylguanosine tRNA methyltransferase + 479 cofit
mRNA_4566 12934 KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins - 148 cofit
mRNA_4567 12935 K10743 RNASEH2A ribonuclease H2 subunit A + 269 cofit
mRNA_4568 12936 Hypothetical Protein + 220 cofit
mRNA_4569 12937 HMMPfam-Integral peroxisomal membrane peroxin-PF06398 - 156 insig.
mRNA_4570 12938 HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959 - 218 cofit
mRNA_4571 12939 KOG4419 5' nucleotidase + 1039 cofit