Gene info for mRNA_4441 in Rhodosporidium toruloides IFO0880

mRNA_4441 12809: SUPERFAMILY--SSF52047

Type 1: Protein-coding gene
Located on scaffold scaffold_3, + strand, nucleotides 187,082 to 188,392

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_4436: 12804 - Hypothetical Protein, at 178306 to 178939 12804 mRNA_4437: 12805 - KOG4629 Predicted mechanosensitive ion channel, at 179176 to 181994 12805 mRNA_4438: 12806 - Hypothetical Protein, at 182518 to 183149 12806 mRNA_4439: 12807 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 183343 to 183707 12807 mRNA_4440: 12808 - KOG2439 Nuclear architecture related protein, at 183991 to 186593 12808 mRNA_4441: 12809 - SUPERFAMILY--SSF52047, at 187082 to 188392 12809 mRNA_4442: 12810 - SUPERFAMILY--SSF52047, at 188576 to 190157 12810 mRNA_4443: 12811 - SUPERFAMILY--SSF52047, at 190783 to 192210 12811 mRNA_4444: 12812 - K14327 UPF2, RENT2 regulator of nonsense transcripts 2, at 192808 to 197198 12812 mRNA_4445: 12813 - K16342 PLA2G4, CPLA2 cytosolic phospholipase A2, at 197325 to 199939 12813 mRNA_4446: 12814 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 200196 to 203838 12814
Locus Name Description Strand Distance (nt) Phenotype
mRNA_4436 12804 Hypothetical Protein + insig.
mRNA_4437 12805 KOG4629 Predicted mechanosensitive ion channel + 237 cofit
mRNA_4438 12806 Hypothetical Protein + 524 cofit
mRNA_4439 12807 BLAST expressed protein [Cryptococcus neoformans var. neofo... - 194 cofit
mRNA_4440 12808 KOG2439 Nuclear architecture related protein + 284 no data
mRNA_4441 12809 SUPERFAMILY--SSF52047 + 489 cofit
mRNA_4442 12810 SUPERFAMILY--SSF52047 + 184 cofit
mRNA_4443 12811 SUPERFAMILY--SSF52047 + 626 cofit
mRNA_4444 12812 K14327 UPF2, RENT2 regulator of nonsense transcripts 2 - 598 no data
mRNA_4445 12813 K16342 PLA2G4, CPLA2 cytosolic phospholipase A2 + 127 cofit
mRNA_4446 12814 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 - 257 cofit