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Gene info for mRNA_4398 in
Rhodosporidium toruloides IFO0880
mRNA_4398 12766:
HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729
Type 1: Protein-coding gene
Located on scaffold scaffold_3, - strand, nucleotides 91,356 to 92,891
Links:
MicrobesOnline
Nearby Genes
500 nt
mRNA_4393: 12761 - K00029 E1.1.1.40, maeB malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+), at 82282 to 84844
12761
mRNA_4394: 12762 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 85046 to 87560
12762
mRNA_4395: 12763 - HMMPfam-RTA1 like protein-PF04479, at 88066 to 89251
12763
mRNA_4396: 12764 - BLAST NAD(P)-dependent alcohol dehydrogenase [Mycena chloro..., at 89473 to 89864
12764
mRNA_4397: 12765 - HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SUPERFAMILY--SSF50129, at 90015 to 90968
12765
mRNA_4398: 12766 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 91356 to 92891
12766
mRNA_4399: 12767 - HMMPfam-CFEM domain-PF05730, at 93703 to 94660
12767
mRNA_4400: 12768 - Hypothetical Protein, at 95230 to 97148
12768
mRNA_4401: 12769 - KOG3303 Predicted alpha-helical protein, potentially involved in replication/repair, at 97723 to 98507
12769
mRNA_4402: 12770 - Hypothetical Protein, at 98627 to 98893
12770
mRNA_4403: 12771 - Hypothetical Protein, at 99143 to 102687
12771
Locus
Name
Description
Strand
Distance (nt)
Phenotype
mRNA_4393
12761
K00029 E1.1.1.40, maeB malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
+
cofit
mRNA_4394
12762
ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701
-
202
cofit
mRNA_4395
12763
HMMPfam-RTA1 like protein-PF04479
+
506
cofit
mRNA_4396
12764
BLAST NAD(P)-dependent alcohol dehydrogenase [Mycena chloro...
-
222
no data
mRNA_4397
12765
HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SUPERFAMILY--SSF50129
-
151
no data
mRNA_4398
12766
HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729
-
388
cofit
mRNA_4399
12767
HMMPfam-CFEM domain-PF05730
+
812
cofit
mRNA_4400
12768
Hypothetical Protein
+
570
cofit
mRNA_4401
12769
KOG3303 Predicted alpha-helical protein, potentially involved in replication/repair
-
575
no data
mRNA_4402
12770
Hypothetical Protein
+
120
cofit
mRNA_4403
12771
Hypothetical Protein
+
250
cofit