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Gene info for mRNA_4393 in
Rhodosporidium toruloides IFO0880
mRNA_4393 12761:
K00029 E1.1.1.40, maeB malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
Type 1: Protein-coding gene
Located on scaffold scaffold_3, + strand, nucleotides 82,282 to 84,844
Links:
MicrobesOnline
Nearby Genes
500 nt
mRNA_4388: 12756 - KOG2084 Predicted histone tail methylase containing SET domain, at 72775 to 74031
12756
mRNA_4389: 12757 - K10735 GINS4, SLD5 GINS complex subunit 4, at 74390 to 75580
12757
mRNA_4390: 12758 - K16261 YAT yeast amino acid transporter, at 76292 to 78680
12758
mRNA_4391: 12759 - Hypothetical Protein, at 79565 to 80188
12759
mRNA_4392: 12760 - KOG3069 Peroxisomal NUDIX hydrolase, at 80185 to 81389
12760
mRNA_4393: 12761 - K00029 E1.1.1.40, maeB malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+), at 82282 to 84844
12761
mRNA_4394: 12762 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 85046 to 87560
12762
mRNA_4395: 12763 - HMMPfam-RTA1 like protein-PF04479, at 88066 to 89251
12763
mRNA_4396: 12764 - BLAST NAD(P)-dependent alcohol dehydrogenase [Mycena chloro..., at 89473 to 89864
12764
mRNA_4397: 12765 - HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SUPERFAMILY--SSF50129, at 90015 to 90968
12765
mRNA_4398: 12766 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 91356 to 92891
12766
Locus
Name
Description
Strand
Distance (nt)
Phenotype
mRNA_4388
12756
KOG2084 Predicted histone tail methylase containing SET domain
-
cofit
mRNA_4389
12757
K10735 GINS4, SLD5 GINS complex subunit 4
-
359
no data
mRNA_4390
12758
K16261 YAT yeast amino acid transporter
+
712
cofit
mRNA_4391
12759
Hypothetical Protein
-
885
cofit
mRNA_4392
12760
KOG3069 Peroxisomal NUDIX hydrolase
-
-3
cofit
mRNA_4393
12761
K00029 E1.1.1.40, maeB malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
+
893
cofit
mRNA_4394
12762
ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701
-
202
cofit
mRNA_4395
12763
HMMPfam-RTA1 like protein-PF04479
+
506
cofit
mRNA_4396
12764
BLAST NAD(P)-dependent alcohol dehydrogenase [Mycena chloro...
-
222
no data
mRNA_4397
12765
HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SUPERFAMILY--SSF50129
-
151
no data
mRNA_4398
12766
HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729
-
388
cofit