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Gene info for mRNA_4174 in
Rhodosporidium toruloides IFO0880
mRNA_4174 12542:
KOG4305 RhoGEF GTPase
Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 1,535,765 to 1,540,719
Links:
MicrobesOnline
Nearby Genes
500 nt
mRNA_4169: 12537 - K13299 GSTK1 glutathione S-transferase kappa 1, at 1522602 to 1523728
12537
mRNA_4170: 12538 - KOG1256 Long-chain acyl-CoA synthetases (AMP-forming), at 1524974 to 1527080
12538
mRNA_4171: 12539 - KOG2806 Chitinase, at 1528014 to 1529581
12539
mRNA_4172: 12540 - KOG1212 Amidases, at 1530143 to 1531631
12540
mRNA_4173: 12541 - KOG2348 Urea transporter, at 1533332 to 1534654
12541
mRNA_4174: 12542 - KOG4305 RhoGEF GTPase, at 1535765 to 1540719
12542
mRNA_4175: 12543 - K03939 NDUFS6 NADH dehydrogenase (ubiquinone) Fe-S protein 6, at 1541206 to 1541936
12543
mRNA_4176: 12544 - KOG4093 Uncharacterized conserved protein, at 1542041 to 1542823
12544
mRNA_4177: 12545 - K15356 VRG4, GONST1 GDP-mannose transporter, at 1543096 to 1544844
12545
mRNA_4178: 12546 - KOG1337 N-methyltransferase, at 1545010 to 1546616
12546
mRNA_4179: 12547 - KOG0429 Ubiquitin-conjugating enzyme-related protein Ft1, involved in programmed cell death, at 1547338 to 1548132
12547
Locus
Name
Description
Strand
Distance (nt)
Phenotype
mRNA_4169
12537
K13299 GSTK1 glutathione S-transferase kappa 1
+
cofit
mRNA_4170
12538
KOG1256 Long-chain acyl-CoA synthetases (AMP-forming)
+
1246
cofit
mRNA_4171
12539
KOG2806 Chitinase
-
934
cofit
mRNA_4172
12540
KOG1212 Amidases
-
562
no data
mRNA_4173
12541
KOG2348 Urea transporter
+
1701
cofit
mRNA_4174
12542
KOG4305 RhoGEF GTPase
-
1111
cofit
mRNA_4175
12543
K03939 NDUFS6 NADH dehydrogenase (ubiquinone) Fe-S protein 6
+
487
strong
mRNA_4176
12544
KOG4093 Uncharacterized conserved protein
+
105
no data
mRNA_4177
12545
K15356 VRG4, GONST1 GDP-mannose transporter
-
273
no data
mRNA_4178
12546
KOG1337 N-methyltransferase
+
166
insig.
mRNA_4179
12547
KOG0429 Ubiquitin-conjugating enzyme-related protein Ft1, involved in programmed cell death
+
722
cofit