Gene info for mRNA_4007 in Rhodosporidium toruloides IFO0880

mRNA_4007 12375: K12373 HEXA_B hexosaminidase

Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 1,133,931 to 1,136,432

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_4002: 12370 - KOG4089 Predicted mitochondrial ribosomal protein L23, at 1122500 to 1123489 12370 mRNA_4003: 12371 - K13667 RUMI, KTELC1 protein glucosyltransferase, at 1123880 to 1126136 12371 mRNA_4004: 12372 - KOG1341 Na+/K+ transporter, at 1126968 to 1131164 12372 mRNA_4005: 12373 - HMMPfam-bZIP transcription factor-PF00170,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 1131746 to 1132749 12373 mRNA_4006: 12374 - Hypothetical Protein, at 1133171 to 1133679 12374 mRNA_4007: 12375 - K12373 HEXA_B hexosaminidase, at 1133931 to 1136432 12375 mRNA_4008: 12376 - K03695 clpB ATP-dependent Clp protease ATP-binding subunit ClpB, at 1136733 to 1139810 12376 mRNA_4009: 12377 - K10639 CCNB1IP1, HEI10 E3 ubiquitin-protein ligase CCNP1IP1, at 1140211 to 1141922 12377 mRNA_4010: 12378 - HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SMART-Leucine-rich repeat - CC (cysteine-containing) subfamily-SM00367,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383, at 1142539 to 1145554 12378 mRNA_4011: 12379 - HMMPfam-Retinoic acid induced 16-like protein-PF10257, at 1145939 to 1149704 12379 mRNA_4012: 12380 - KOG2370 Cactin, at 1149929 to 1152487 12380
Locus Name Description Strand Distance (nt) Phenotype
mRNA_4002 12370 KOG4089 Predicted mitochondrial ribosomal protein L23 - no data
mRNA_4003 12371 K13667 RUMI, KTELC1 protein glucosyltransferase + 391 cofit
mRNA_4004 12372 KOG1341 Na+/K+ transporter + 832 strong
mRNA_4005 12373 HMMPfam-bZIP transcription factor-PF00170,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959 - 582 cofit
mRNA_4006 12374 Hypothetical Protein + 422 cofit
mRNA_4007 12375 K12373 HEXA_B hexosaminidase - 252 cofit
mRNA_4008 12376 K03695 clpB ATP-dependent Clp protease ATP-binding subunit ClpB - 301 cofit
mRNA_4009 12377 K10639 CCNB1IP1, HEI10 E3 ubiquitin-protein ligase CCNP1IP1 - 401 cofit
mRNA_4010 12378 HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SMART-Leucine-rich repeat - CC (cysteine-containing) subfamily-SM00367,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383 - 617 cofit
mRNA_4011 12379 HMMPfam-Retinoic acid induced 16-like protein-PF10257 - 385 cofit
mRNA_4012 12380 KOG2370 Cactin - 225 no data