Gene info for mRNA_3938 in Rhodosporidium toruloides IFO0880

mRNA_3938 12306: HMMPfam-Dioxygenase-PF00775,HMMPfam-Catechol dioxygenase N terminus-PF04444,SUPERFAMILY--SSF49482

Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 948,000 to 949,684

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_3933: 12301 - Hypothetical Protein, at 936850 to 939133 12301 mRNA_3934: 12302 - K01955 carB, CPA2 carbamoyl-phosphate synthase large subunit, at 940362 to 944260 12302 mRNA_3935: 12303 - HMMPfam-ER protein Pkr1-PF08636, at 944779 to 945196 12303 mRNA_3936: 12304 - Hypothetical Protein, at 945661 to 946219 12304 mRNA_3937: 12305 - KOG0692 Pentafunctional AROM protein, at 946371 to 947832 12305 mRNA_3938: 12306 - HMMPfam-Dioxygenase-PF00775,HMMPfam-Catechol dioxygenase N terminus-PF04444,SUPERFAMILY--SSF49482, at 948000 to 949684 12306 mRNA_3939: 12307 - K13954 yiaY alcohol dehydrogenase, at 950019 to 951719 12307 mRNA_3940: 12308 - KOG3162 Mitochondrial/chloroplast ribosomal protein S18, at 952149 to 952942 12308 mRNA_3941: 12309 - Hypothetical Protein, at 953111 to 953710 12309 mRNA_3942: 12310 - K20298 VPS52 vacuolar protein sorting-associated protein 52, at 954085 to 956912 12310 mRNA_3943: 12311 - K10843 ERCC3, XPB DNA excision repair protein ERCC-3, at 957047 to 960564 12311
Locus Name Description Strand Distance (nt) Phenotype
mRNA_3933 12301 Hypothetical Protein - cofit
mRNA_3934 12302 K01955 carB, CPA2 carbamoyl-phosphate synthase large subunit + 1229 strong
mRNA_3935 12303 HMMPfam-ER protein Pkr1-PF08636 - 519 insig.
mRNA_3936 12304 Hypothetical Protein + 465 cofit
mRNA_3937 12305 KOG0692 Pentafunctional AROM protein - 152 cofit
mRNA_3938 12306 HMMPfam-Dioxygenase-PF00775,HMMPfam-Catechol dioxygenase N terminus-PF04444,SUPERFAMILY--SSF49482 - 168 cofit
mRNA_3939 12307 K13954 yiaY alcohol dehydrogenase + 335 cofit
mRNA_3940 12308 KOG3162 Mitochondrial/chloroplast ribosomal protein S18 + 430 no data
mRNA_3941 12309 Hypothetical Protein - 169 no data
mRNA_3942 12310 K20298 VPS52 vacuolar protein sorting-associated protein 52 - 375 cofit
mRNA_3943 12311 K10843 ERCC3, XPB DNA excision repair protein ERCC-3 + 135 no data