Gene info for mRNA_3844 in Rhodosporidium toruloides IFO0880

mRNA_3844 12212: HMMPfam-Afadin- and alpha -actinin-Binding-PF11559

Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 723,329 to 725,612

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_3839: 12207 - BLAST E3 ubiquitin-protein ligase RNF213 [Mus musculus] [Rh..., at 713356 to 714077 12207 mRNA_3840: 12208 - K18849 BMT2 25S rRNA (adenine2142-N1)-methyltransferase, at 714373 to 715825 12208 mRNA_3841: 12209 - K13431 SRPR signal recognition particle receptor subunit alpha, at 716088 to 718591 12209 mRNA_3842: 12210 - K18179 COA6 cytochrome c oxidase assembly factor 6, at 718852 to 719357 12210 mRNA_3843: 12211 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 719514 to 723213 12211 mRNA_3844: 12212 - HMMPfam-Afadin- and alpha -actinin-Binding-PF11559, at 723329 to 725612 12212 mRNA_3845: 12213 - HMMPfam-Putative methyltransferase-PF10294,SUPERFAMILY--SSF53335, at 726085 to 727619 12213 mRNA_3846: 12214 - HMMPfam-HORMA domain-PF02301,HMMPfam-Zinc-finger double-stranded RNA-binding-PF12171,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,ProSiteProfiles-HORMA domain profile.-PS50815,SMART-zinc finger-SM00355,SUPERFAMILY--SSF56019,SUPERFAMILY--SSF57667, at 728608 to 730842 12214 mRNA_3847: 12215 - Hypothetical Protein, at 732647 to 733359 12215 mRNA_3848: 12216 - KOG1817 Ribonuclease, at 733873 to 734892 12216 mRNA_3849: 12217 - Hypothetical Protein, at 735253 to 736177 12217
Locus Name Description Strand Distance (nt) Phenotype
mRNA_3839 12207 BLAST E3 ubiquitin-protein ligase RNF213 [Mus musculus] [Rh... + cofit
mRNA_3840 12208 K18849 BMT2 25S rRNA (adenine2142-N1)-methyltransferase - 296 cofit
mRNA_3841 12209 K13431 SRPR signal recognition particle receptor subunit alpha + 263 cofit
mRNA_3842 12210 K18179 COA6 cytochrome c oxidase assembly factor 6 - 261 cofit
mRNA_3843 12211 HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232 + 157 cofit
mRNA_3844 12212 HMMPfam-Afadin- and alpha -actinin-Binding-PF11559 - 116 cofit
mRNA_3845 12213 HMMPfam-Putative methyltransferase-PF10294,SUPERFAMILY--SSF53335 - 473 insig.
mRNA_3846 12214 HMMPfam-HORMA domain-PF02301,HMMPfam-Zinc-finger double-stranded RNA-binding-PF12171,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,ProSiteProfiles-HORMA domain profile.-PS50815,SMART-zinc finger-SM00355,SUPERFAMILY--SSF56019,SUPERFAMILY--SSF57667 - 989 insig.
mRNA_3847 12215 Hypothetical Protein - 1805 no data
mRNA_3848 12216 KOG1817 Ribonuclease + 514 cofit
mRNA_3849 12217 Hypothetical Protein + 361 cofit