Gene info for mRNA_3781 in Rhodosporidium toruloides IFO0880

mRNA_3781 12149: K12821 PRPF40, PRP40 pre-mRNA-processing factor 40

Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 565,558 to 568,249

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_3776: 12144 - HMMPfam-FHA domain-PF00498,HMMPfam-Ring finger domain-PF13639,ProSiteProfiles-Forkhead-associated (FHA) domain profile.-PS50006,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SMART-Ring finger-SM00184,SMART-Forkhead associated domain-SM00240,SUPERFAMILY--SSF49879,SUPERFAMILY--SSF57850, at 553955 to 556574 12144 mRNA_3777: 12145 - K20346 TMED4_9_11 p24 family protein alpha, at 557180 to 558034 12145 mRNA_3778: 12146 - HMMPfam-Endonuclease V-PF04493, at 558485 to 559797 12146 mRNA_3779: 12147 - HMMPfam-Spc19-PF08287, at 560572 to 561347 12147 mRNA_3780: 12148 - KOG1426 FOG RCC1 domain, at 561594 to 563970 12148 mRNA_3781: 12149 - K12821 PRPF40, PRP40 pre-mRNA-processing factor 40, at 565558 to 568249 12149 mRNA_3782: 12150 - K04354 PPP2R2 serine/threonine-protein phosphatase 2A regulatory subunit B, at 568603 to 571218 12150 mRNA_3783: 12151 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 572145 to 573439 12151 mRNA_3784: 12152 - KOG1188 WD40 repeat protein, at 573950 to 575324 12152 mRNA_3785: 12153 - K15178 RTF1 RNA polymerase-associated protein RTF1, at 575682 to 577961 12153 mRNA_3786: 12154 - K00006 GPD1 glycerol-3-phosphate dehydrogenase (NAD+), at 578477 to 580207 12154
Locus Name Description Strand Distance (nt) Phenotype
mRNA_3776 12144 HMMPfam-FHA domain-PF00498,HMMPfam-Ring finger domain-PF13639,ProSiteProfiles-Forkhead-associated (FHA) domain profile.-PS50006,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SMART-Ring finger-SM00184,SMART-Forkhead associated domain-SM00240,SUPERFAMILY--SSF49879,SUPERFAMILY--SSF57850 - sig.
mRNA_3777 12145 K20346 TMED4_9_11 p24 family protein alpha - 606 cofit
mRNA_3778 12146 HMMPfam-Endonuclease V-PF04493 + 451 cofit
mRNA_3779 12147 HMMPfam-Spc19-PF08287 + 775 no data
mRNA_3780 12148 KOG1426 FOG RCC1 domain + 247 cofit
mRNA_3781 12149 K12821 PRPF40, PRP40 pre-mRNA-processing factor 40 - 1588 cofit
mRNA_3782 12150 K04354 PPP2R2 serine/threonine-protein phosphatase 2A regulatory subunit B + 354 no data
mRNA_3783 12151 KOG1502 Flavonol reductase/cinnamoyl-CoA reductase + 927 cofit
mRNA_3784 12152 KOG1188 WD40 repeat protein - 511 no data
mRNA_3785 12153 K15178 RTF1 RNA polymerase-associated protein RTF1 - 358 cofit
mRNA_3786 12154 K00006 GPD1 glycerol-3-phosphate dehydrogenase (NAD+) - 516 strong