Gene mRNA_3738 in Rhodosporidium toruloides IFO0880

mRNA_3738 12106: K06689 UBE2D, UBC4, UBC5 ubiquitin-conjugating enzyme E2 D in Rhodosporidium toruloides IFO0880

Type 1: Protein-coding gene
Located on scaffold scaffold_2, + strand, nucleotides 466,684 to 467,899

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_3733: 12101 - BLAST Hybrid signal transduction histidine kinase B [Leucoa..., at 457405 to 460471 12101 mRNA_3734: 12102 - Interpro Protein HRI1, at 460954 to 461748 12102 mRNA_3735: 12103 - KOG4842 Protein involved in sister chromatid separation and/or segregation, at 461901 to 463089 12103 mRNA_3736: 12104 - K00573 E2.1.1.77, pcm protein-L-isoaspartate(D-aspartate) O-methyltransferase, at 463337 to 464527 12104 mRNA_3737: 12105 - BLAST TPR-2 domain protein [Rhizoctonia solani AG-3 Rhs1AP], at 464797 to 466425 12105 mRNA_3738: 12106 - K06689 UBE2D, UBC4, UBC5 ubiquitin-conjugating enzyme E2 D, at 466684 to 467899 12106 mRNA_3739: 12107 - HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,ProSiteProfiles-Expansin, family-45 endoglucanase-like domain profile.-PS50842,SUPERFAMILY--SSF50685, at 468433 to 469585 12107 mRNA_3740: 12108 - Hypothetical Protein, at 469899 to 470347 12108 mRNA_3741: 12109 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 470340 to 473925 12109 mRNA_3742: 12110 - SMART-Parallel beta-helix repeats-SM00710,SUPERFAMILY--SSF51126, at 474492 to 476469 12110 mRNA_3743: 12111 - K15289 SLC35F5 solute carrier family 35, member F5, at 476780 to 478513 12111
Locus Name Description Strand Distance (nt) Phenotype
mRNA_3733 12101 BLAST Hybrid signal transduction histidine kinase B [Leucoa... - cofit
mRNA_3734 12102 Interpro Protein HRI1 - 483 cofit
mRNA_3735 12103 KOG4842 Protein involved in sister chromatid separation and/or segregation + 153 cofit
mRNA_3736 12104 K00573 E2.1.1.77, pcm protein-L-isoaspartate(D-aspartate) O-methyltransferase - 248 cofit
mRNA_3737 12105 BLAST TPR-2 domain protein [Rhizoctonia solani AG-3 Rhs1AP] + 270 cofit
mRNA_3738 12106 K06689 UBE2D, UBC4, UBC5 ubiquitin-conjugating enzyme E2 D + 259 no data
mRNA_3739 12107 HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,ProSiteProfiles-Expansin, family-45 endoglucanase-like domain profile.-PS50842,SUPERFAMILY--SSF50685 + 534 cofit
mRNA_3740 12108 Hypothetical Protein + 314 cofit
mRNA_3741 12109 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + -7 cofit
mRNA_3742 12110 SMART-Parallel beta-helix repeats-SM00710,SUPERFAMILY--SSF51126 + 567 cofit
mRNA_3743 12111 K15289 SLC35F5 solute carrier family 35, member F5 - 311 cofit