Gene mRNA_3587 in Rhodosporidium toruloides IFO0880

mRNA_3587 11955: K12836 U2AF1 splicing factor U2AF 35 kDa subunit in Rhodosporidium toruloides IFO0880

Type 1: Protein-coding gene
Located on scaffold scaffold_2, + strand, nucleotides 111,593 to 112,967

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_3582: 11950 - HMMPfam-Polycystin cation channel-PF08016, at 100447 to 103297 11950 mRNA_3583: 11951 - Hypothetical Protein, at 104086 to 104307 11951 mRNA_3584: 11952 - K00122 FDH formate dehydrogenase, at 104607 to 106241 11952 mRNA_3585: 11953 - KOG1339 Aspartyl protease, at 106973 to 108703 11953 mRNA_3586: 11954 - HMMPfam-Membrane fusion protein Use1-PF09753, at 110146 to 111411 11954 mRNA_3587: 11955 - K12836 U2AF1 splicing factor U2AF 35 kDa subunit, at 111593 to 112967 11955 mRNA_3588: 11956 - KOG0254 Predicted transporter (major facilitator superfamily), at 113212 to 115744 11956 mRNA_3589: 11957 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF101908,SUPERFAMILY--SSF81383, at 116230 to 117801 11957 mRNA_3590: 11958 - K02136 ATPeF1G, ATP5C1, ATP3 F-type H+-transporting ATPase subunit gamma, at 118835 to 120315 11958 mRNA_3591: 11959 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 120588 to 122766 11959 mRNA_3592: 11960 - KOG2664 Small nuclear RNA activating protein complex - 50kD subunit (SNAP50), at 123173 to 125228 11960
Locus Name Description Strand Distance (nt) Phenotype
mRNA_3582 11950 HMMPfam-Polycystin cation channel-PF08016 - cofit
mRNA_3583 11951 Hypothetical Protein + 789 no data
mRNA_3584 11952 K00122 FDH formate dehydrogenase - 300 insig.
mRNA_3585 11953 KOG1339 Aspartyl protease - 732 insig.
mRNA_3586 11954 HMMPfam-Membrane fusion protein Use1-PF09753 - 1443 no data
mRNA_3587 11955 K12836 U2AF1 splicing factor U2AF 35 kDa subunit + 182 no data
mRNA_3588 11956 KOG0254 Predicted transporter (major facilitator superfamily) - 245 cofit
mRNA_3589 11957 HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF101908,SUPERFAMILY--SSF81383 - 486 cofit
mRNA_3590 11958 K02136 ATPeF1G, ATP5C1, ATP3 F-type H+-transporting ATPase subunit gamma + 1034 no data
mRNA_3591 11959 KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases - 273 cofit
mRNA_3592 11960 KOG2664 Small nuclear RNA activating protein complex - 50kD subunit (SNAP50) + 407 no data