Gene info for mRNA_3562 in Rhodosporidium toruloides IFO0880

mRNA_3562 11930: KOG0017 FOG Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations

Type 1: Protein-coding gene
Located on scaffold scaffold_2, - strand, nucleotides 59,099 to 59,542

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_3557: 11925 - K01634 SGPL1, DPL1 sphinganine-1-phosphate aldolase, at 41446 to 43898 11925 mRNA_3558: 11926 - K14808 DDX54, DBP10 ATP-dependent RNA helicase DDX54/DBP10, at 44062 to 47314 11926 mRNA_3559: 11927 - K18622 ADD adducin, at 47596 to 49033 11927 mRNA_3560: 11928 - K06101 ASH1L histone-lysine N-methyltransferase ASH1L, at 49471 to 51932 11928 mRNA_3561: 11929 - K06174 ABCE1, Rli1 ATP-binding cassette, sub-family E, member 1, at 53453 to 55273 11929 mRNA_3562: 11930 - KOG0017 FOG Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations, at 59099 to 59542 11930 mRNA_3563: 11931 - Hypothetical Protein, at 61951 to 62967 11931 mRNA_3564: 11932 - Hypothetical Protein, at 63584 to 64390 11932 mRNA_3565: 11933 - KOG0254 Predicted transporter (major facilitator superfamily), at 64818 to 67834 11933 mRNA_3566: 11934 - HMMPfam-Opioid growth factor receptor (OGFr) conserved region-PF04664, at 68325 to 69478 11934 mRNA_3567: 11935 - KOG1760 Molecular chaperone Prefoldin, subunit 4, at 70046 to 70788 11935
Locus Name Description Strand Distance (nt) Phenotype
mRNA_3557 11925 K01634 SGPL1, DPL1 sphinganine-1-phosphate aldolase + cofit
mRNA_3558 11926 K14808 DDX54, DBP10 ATP-dependent RNA helicase DDX54/DBP10 - 164 cofit
mRNA_3559 11927 K18622 ADD adducin + 282 cofit
mRNA_3560 11928 K06101 ASH1L histone-lysine N-methyltransferase ASH1L - 438 insig.
mRNA_3561 11929 K06174 ABCE1, Rli1 ATP-binding cassette, sub-family E, member 1 + 1521 no data
mRNA_3562 11930 KOG0017 FOG Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations - 3826 cofit
mRNA_3563 11931 Hypothetical Protein - 2409 cofit
mRNA_3564 11932 Hypothetical Protein + 617 cofit
mRNA_3565 11933 KOG0254 Predicted transporter (major facilitator superfamily) - 428 cofit
mRNA_3566 11934 HMMPfam-Opioid growth factor receptor (OGFr) conserved region-PF04664 - 491 cofit
mRNA_3567 11935 KOG1760 Molecular chaperone Prefoldin, subunit 4 - 568 no data