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Gene info for mRNA_3503 in
Rhodosporidium toruloides IFO0880
mRNA_3503 11871:
K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family
Type 1: Protein-coding gene
Located on scaffold scaffold_18, - strand, nucleotides 251,865 to 254,204
Links:
MicrobesOnline
Nearby Genes
500 nt
mRNA_3498: 11866 - K18064 ACR2 arsenical-resistance protein 2, at 242240 to 242927
11866
mRNA_3499: 11867 - K00231 PPOX, hemY oxygen-dependent protoporphyrinogen oxidase, at 243095 to 244996
11867
mRNA_3500: 11868 - KOG2519 5'-3' exonuclease, at 245700 to 248074
11868
mRNA_3501: 11869 - KOG3791 Predicted RNA-binding protein involved in translational regulation, at 248480 to 250835
11869
mRNA_3502: 11870 - Hypothetical Protein, at 250882 to 251460
11870
mRNA_3503: 11871 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 251865 to 254204
11871
mRNA_3504: 11872 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 255381 to 257476
11872
mRNA_3505: 11873 - KOG3699 Cytoskeletal protein Adducin, at 257806 to 259201
11873
mRNA_3506: 11874 - HMMPfam-Asp/Glu/Hydantoin racemase-PF01177, at 259634 to 260419
11874
mRNA_3507: 11875 - K12251 aguB N-carbamoylputrescine amidase, at 260634 to 261961
11875
mRNA_3508: 11876 - K00273 DAO, aao D-amino-acid oxidase, at 262160 to 263731
11876
Locus
Name
Description
Strand
Distance (nt)
Phenotype
mRNA_3498
11866
K18064 ACR2 arsenical-resistance protein 2
+
cofit
mRNA_3499
11867
K00231 PPOX, hemY oxygen-dependent protoporphyrinogen oxidase
-
168
no data
mRNA_3500
11868
KOG2519 5'-3' exonuclease
+
704
cofit
mRNA_3501
11869
KOG3791 Predicted RNA-binding protein involved in translational regulation
-
406
cofit
mRNA_3502
11870
Hypothetical Protein
-
47
no data
mRNA_3503
11871
K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family
-
405
cofit
mRNA_3504
11872
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
-
1177
cofit
mRNA_3505
11873
KOG3699 Cytoskeletal protein Adducin
-
330
cofit
mRNA_3506
11874
HMMPfam-Asp/Glu/Hydantoin racemase-PF01177
+
433
cofit
mRNA_3507
11875
K12251 aguB N-carbamoylputrescine amidase
-
215
cofit
mRNA_3508
11876
K00273 DAO, aao D-amino-acid oxidase
+
199
cofit