Gene info for mRNA_3500 in Rhodosporidium toruloides IFO0880

mRNA_3500 11868: KOG2519 5'-3' exonuclease

Type 1: Protein-coding gene
Located on scaffold scaffold_18, + strand, nucleotides 245,700 to 248,074

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_3495: 11863 - KOG4118 Uncharacterized conserved protein, at 238693 to 239237 11863 mRNA_3496: 11864 - KOG1198 Zinc-binding oxidoreductase, at 239425 to 240814 11864 mRNA_3497: 11865 - HMMPfam-Ubiquitin family-PF00240,ProSiteProfiles-Ubiquitin domain profile.-PS50053,SMART-Ubiquitin homologues-SM00213,SUPERFAMILY--SSF54236, at 241064 to 241942 11865 mRNA_3498: 11866 - K18064 ACR2 arsenical-resistance protein 2, at 242240 to 242927 11866 mRNA_3499: 11867 - K00231 PPOX, hemY oxygen-dependent protoporphyrinogen oxidase, at 243095 to 244996 11867 mRNA_3500: 11868 - KOG2519 5'-3' exonuclease, at 245700 to 248074 11868 mRNA_3501: 11869 - KOG3791 Predicted RNA-binding protein involved in translational regulation, at 248480 to 250835 11869 mRNA_3502: 11870 - Hypothetical Protein, at 250882 to 251460 11870 mRNA_3503: 11871 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 251865 to 254204 11871 mRNA_3504: 11872 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 255381 to 257476 11872 mRNA_3505: 11873 - KOG3699 Cytoskeletal protein Adducin, at 257806 to 259201 11873
Locus Name Description Strand Distance (nt) Phenotype
mRNA_3495 11863 KOG4118 Uncharacterized conserved protein + no data
mRNA_3496 11864 KOG1198 Zinc-binding oxidoreductase - 188 cofit
mRNA_3497 11865 HMMPfam-Ubiquitin family-PF00240,ProSiteProfiles-Ubiquitin domain profile.-PS50053,SMART-Ubiquitin homologues-SM00213,SUPERFAMILY--SSF54236 + 250 cofit
mRNA_3498 11866 K18064 ACR2 arsenical-resistance protein 2 + 298 cofit
mRNA_3499 11867 K00231 PPOX, hemY oxygen-dependent protoporphyrinogen oxidase - 168 no data
mRNA_3500 11868 KOG2519 5'-3' exonuclease + 704 cofit
mRNA_3501 11869 KOG3791 Predicted RNA-binding protein involved in translational regulation - 406 cofit
mRNA_3502 11870 Hypothetical Protein - 47 no data
mRNA_3503 11871 K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family - 405 cofit
mRNA_3504 11872 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 - 1177 cofit
mRNA_3505 11873 KOG3699 Cytoskeletal protein Adducin - 330 cofit