Gene info for mRNA_3456 in Rhodosporidium toruloides IFO0880

mRNA_3456 11824: HMMPfam-Family of unknown function (DUF500)-PF04366

Type 1: Protein-coding gene
Located on scaffold scaffold_18, + strand, nucleotides 142,552 to 143,804

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_3451: 11819 - HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 132983 to 136040 11819 mRNA_3452: 11820 - HMMPfam-Protein of unknown function (DUF2454)-PF10521,SUPERFAMILY--SSF48371, at 136126 to 138036 11820 mRNA_3453: 11821 - KOG2959 Transcriptional regulator, at 138350 to 139548 11821 mRNA_3454: 11822 - SUPERFAMILY--SSF52047, at 139645 to 140934 11822 mRNA_3455: 11823 - K03424 tatD TatD DNase family protein, at 141028 to 142309 11823 mRNA_3456: 11824 - HMMPfam-Family of unknown function (DUF500)-PF04366, at 142552 to 143804 11824 mRNA_3457: 11825 - KOG1843 Uncharacterized conserved protein, at 144074 to 145634 11825 mRNA_3458: 11826 - K03857 PIGA, GPI3 phosphatidylinositol glycan, class A, at 145752 to 147635 11826 mRNA_3459: 11827 - ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 147794 to 151467 11827 mRNA_3460: 11828 - HMMPfam-Fasciclin domain-PF02469,SUPERFAMILY--SSF82153, at 151624 to 153827 11828 mRNA_3461: 11829 - KOG1217 Fibrillins and related proteins containing Ca2+-binding EGF-like domains, at 154218 to 156143 11829
Locus Name Description Strand Distance (nt) Phenotype
mRNA_3451 11819 HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 + cofit
mRNA_3452 11820 HMMPfam-Protein of unknown function (DUF2454)-PF10521,SUPERFAMILY--SSF48371 - 86 no data
mRNA_3453 11821 KOG2959 Transcriptional regulator + 314 cofit
mRNA_3454 11822 SUPERFAMILY--SSF52047 - 97 insig.
mRNA_3455 11823 K03424 tatD TatD DNase family protein + 94 cofit
mRNA_3456 11824 HMMPfam-Family of unknown function (DUF500)-PF04366 + 243 cofit
mRNA_3457 11825 KOG1843 Uncharacterized conserved protein + 270 insig.
mRNA_3458 11826 K03857 PIGA, GPI3 phosphatidylinositol glycan, class A - 118 no data
mRNA_3459 11827 ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044 + 159 insig.
mRNA_3460 11828 HMMPfam-Fasciclin domain-PF02469,SUPERFAMILY--SSF82153 + 157 cofit
mRNA_3461 11829 KOG1217 Fibrillins and related proteins containing Ca2+-binding EGF-like domains - 391 insig.