Gene info for mRNA_3453 in Rhodosporidium toruloides IFO0880

mRNA_3453 11821: KOG2959 Transcriptional regulator

Type 1: Protein-coding gene
Located on scaffold scaffold_18, + strand, nucleotides 138,350 to 139,548

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_3448: 11816 - HMMPfam-Peptidase M50B-like-PF13398, at 125268 to 126548 11816 mRNA_3449: 11817 - HMMPfam-Integral peroxisomal membrane peroxin-PF06398, at 126631 to 128651 11817 mRNA_3450: 11818 - K20131 RABGEF1 Rab5 GDP/GTP exchange factor, at 129414 to 132360 11818 mRNA_3451: 11819 - HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 132983 to 136040 11819 mRNA_3452: 11820 - HMMPfam-Protein of unknown function (DUF2454)-PF10521,SUPERFAMILY--SSF48371, at 136126 to 138036 11820 mRNA_3453: 11821 - KOG2959 Transcriptional regulator, at 138350 to 139548 11821 mRNA_3454: 11822 - SUPERFAMILY--SSF52047, at 139645 to 140934 11822 mRNA_3455: 11823 - K03424 tatD TatD DNase family protein, at 141028 to 142309 11823 mRNA_3456: 11824 - HMMPfam-Family of unknown function (DUF500)-PF04366, at 142552 to 143804 11824 mRNA_3457: 11825 - KOG1843 Uncharacterized conserved protein, at 144074 to 145634 11825 mRNA_3458: 11826 - K03857 PIGA, GPI3 phosphatidylinositol glycan, class A, at 145752 to 147635 11826
Locus Name Description Strand Distance (nt) Phenotype
mRNA_3448 11816 HMMPfam-Peptidase M50B-like-PF13398 + cofit
mRNA_3449 11817 HMMPfam-Integral peroxisomal membrane peroxin-PF06398 - 83 no data
mRNA_3450 11818 K20131 RABGEF1 Rab5 GDP/GTP exchange factor - 763 cofit
mRNA_3451 11819 HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 + 623 cofit
mRNA_3452 11820 HMMPfam-Protein of unknown function (DUF2454)-PF10521,SUPERFAMILY--SSF48371 - 86 no data
mRNA_3453 11821 KOG2959 Transcriptional regulator + 314 cofit
mRNA_3454 11822 SUPERFAMILY--SSF52047 - 97 insig.
mRNA_3455 11823 K03424 tatD TatD DNase family protein + 94 cofit
mRNA_3456 11824 HMMPfam-Family of unknown function (DUF500)-PF04366 + 243 cofit
mRNA_3457 11825 KOG1843 Uncharacterized conserved protein + 270 insig.
mRNA_3458 11826 K03857 PIGA, GPI3 phosphatidylinositol glycan, class A - 118 no data