Gene info for mRNA_3420 in Rhodosporidium toruloides IFO0880

mRNA_3420 11788: HMMPfam-ATP dependent DNA ligase domain-PF01068,HMMPfam-DNA ligase N terminus-PF04675,ProSiteProfiles-ATP-dependent DNA ligase family profile.-PS50160,SUPERFAMILY--SSF56091

Type 1: Protein-coding gene
Located on scaffold scaffold_18, + strand, nucleotides 53,705 to 57,912

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_3415: 11783 - Hypothetical Protein, at 38660 to 40672 11783 mRNA_3416: 11784 - Hypothetical Protein, at 42396 to 43510 11784 mRNA_3417: 11785 - Hypothetical Protein, at 43744 to 46912 11785 mRNA_3418: 11786 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 47383 to 48909 11786 mRNA_3419: 11787 - K01120 cpdP 3',5'-cyclic-nucleotide phosphodiesterase, at 50010 to 53314 11787 mRNA_3420: 11788 - HMMPfam-ATP dependent DNA ligase domain-PF01068,HMMPfam-DNA ligase N terminus-PF04675,ProSiteProfiles-ATP-dependent DNA ligase family profile.-PS50160,SUPERFAMILY--SSF56091, at 53705 to 57912 11788 mRNA_3421: 11789 - K14297 NUP98, ADAR2, NUP116 nuclear pore complex protein Nup98-Nup96, at 58356 to 61690 11789 mRNA_3422: 11790 - KOG2882 p-Nitrophenyl phosphatase, at 61810 to 63146 11790 mRNA_3423: 11791 - KOG3655 Drebrins and related actin binding proteins, at 63597 to 64502 11791 mRNA_3424: 11792 - Hypothetical Protein, at 64972 to 67736 11792 mRNA_3425: 11793 - K00789 metK S-adenosylmethionine synthetase, at 67905 to 69207 11793
Locus Name Description Strand Distance (nt) Phenotype
mRNA_3415 11783 Hypothetical Protein - cofit
mRNA_3416 11784 Hypothetical Protein + 1724 cofit
mRNA_3417 11785 Hypothetical Protein - 234 insig.
mRNA_3418 11786 KOG1502 Flavonol reductase/cinnamoyl-CoA reductase + 471 insig.
mRNA_3419 11787 K01120 cpdP 3',5'-cyclic-nucleotide phosphodiesterase + 1101 strong
mRNA_3420 11788 HMMPfam-ATP dependent DNA ligase domain-PF01068,HMMPfam-DNA ligase N terminus-PF04675,ProSiteProfiles-ATP-dependent DNA ligase family profile.-PS50160,SUPERFAMILY--SSF56091 + 391 cofit
mRNA_3421 11789 K14297 NUP98, ADAR2, NUP116 nuclear pore complex protein Nup98-Nup96 + 444 no data
mRNA_3422 11790 KOG2882 p-Nitrophenyl phosphatase - 120 cofit
mRNA_3423 11791 KOG3655 Drebrins and related actin binding proteins + 451 cofit
mRNA_3424 11792 Hypothetical Protein + 470 cofit
mRNA_3425 11793 K00789 metK S-adenosylmethionine synthetase - 169 cofit