Gene mRNA_3176 in Rhodosporidium toruloides IFO0880

mRNA_3176 11544: K17301 COPB1, SEC26 coatomer subunit beta in Rhodosporidium toruloides IFO0880

Type 1: Protein-coding gene
Located on scaffold scaffold_17, + strand, nucleotides 17,776 to 21,807

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_3171: 11539 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048, at 4085 to 5766 11539 mRNA_3172: 11540 - Hypothetical Protein, at 6329 to 7697 11540 mRNA_3173: 11541 - K09497 CCT5 T-complex protein 1 subunit epsilon, at 7947 to 10272 11541 mRNA_3174: 11542 - K00953 FLAD1 FAD synthetase, at 10754 to 11960 11542 mRNA_3175: 11543 - K01191 E3.2.1.24 alpha-mannosidase, at 12407 to 17406 11543 mRNA_3176: 11544 - K17301 COPB1, SEC26 coatomer subunit beta, at 17776 to 21807 11544 mRNA_3177: 11545 - KOG2164 Predicted E3 ubiquitin ligase, at 22085 to 24622 11545 mRNA_3178: 11546 - KOG4561 Uncharacterized conserved protein, contains TBC domain, at 25091 to 26696 11546 mRNA_3179: 11547 - Hypothetical Protein, at 26940 to 28412 11547 mRNA_3180: 11548 - ProSitePatterns-Zinc finger RanBP2-type signature.-PS01358,SUPERFAMILY--SSF90209, at 29208 to 30655 11548 mRNA_3181: 11549 - KOG4842 Protein involved in sister chromatid separation and/or segregation, at 30988 to 32695 11549
Locus Name Description Strand Distance (nt) Phenotype
mRNA_3171 11539 ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048 - cofit
mRNA_3172 11540 Hypothetical Protein + 563 cofit
mRNA_3173 11541 K09497 CCT5 T-complex protein 1 subunit epsilon - 250 no data
mRNA_3174 11542 K00953 FLAD1 FAD synthetase + 482 no data
mRNA_3175 11543 K01191 E3.2.1.24 alpha-mannosidase - 447 cofit
mRNA_3176 11544 K17301 COPB1, SEC26 coatomer subunit beta + 370 no data
mRNA_3177 11545 KOG2164 Predicted E3 ubiquitin ligase + 278 cofit
mRNA_3178 11546 KOG4561 Uncharacterized conserved protein, contains TBC domain - 469 cofit
mRNA_3179 11547 Hypothetical Protein + 244 no data
mRNA_3180 11548 ProSitePatterns-Zinc finger RanBP2-type signature.-PS01358,SUPERFAMILY--SSF90209 - 796 cofit
mRNA_3181 11549 KOG4842 Protein involved in sister chromatid separation and/or segregation - 333 insig.