Gene info for mRNA_3116 in Rhodosporidium toruloides IFO0880

mRNA_3116 11484: BLAST Pogo transposable element [Larimichthys crocea]

Type 1: Protein-coding gene
Located on scaffold scaffold_16, + strand, nucleotides 356,999 to 357,616

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_3111: 11479 - K09788 prpF 2-methylaconitate isomerase, at 349482 to 350899 11479 mRNA_3112: 11480 - Hypothetical Protein, at 351079 to 352331 11480 mRNA_3113: 11481 - K11361 SPT20, ADA5 transcription factor SPT20, at 352715 to 353874 11481 mRNA_3114: 11482 - BLAST c6 zinc finger domain containing protein [Diplodia co..., at 354324 to 355899 11482 mRNA_3115: 11483 - Hypothetical Protein, at 356182 to 356910 11483 mRNA_3116: 11484 - BLAST Pogo transposable element [Larimichthys crocea], at 356999 to 357616 11484 mRNA_3117: 11485 - KOG1110 Putative steroid membrane receptor Hpr6.6/25-Dx, at 357751 to 358834 11485 mRNA_3118: 11486 - K01881 PARS, proS prolyl-tRNA synthetase, at 359416 to 362125 11486 mRNA_3119: 11487 - BLAST Spindle pole body protein pcp1 [Hypsizygus marmoreus], at 362785 to 367104 11487 mRNA_3120: 11488 - BLAST Protein cps3 [Rhizoctonia solani], at 367437 to 369368 11488 mRNA_3121: 11489 - KOG1039 Predicted E3 ubiquitin ligase, at 369378 to 369678 11489
Locus Name Description Strand Distance (nt) Phenotype
mRNA_3111 11479 K09788 prpF 2-methylaconitate isomerase + cofit
mRNA_3112 11480 Hypothetical Protein + 180 cofit
mRNA_3113 11481 K11361 SPT20, ADA5 transcription factor SPT20 - 384 cofit
mRNA_3114 11482 BLAST c6 zinc finger domain containing protein [Diplodia co... - 450 cofit
mRNA_3115 11483 Hypothetical Protein + 283 insig.
mRNA_3116 11484 BLAST Pogo transposable element [Larimichthys crocea] + 89 insig.
mRNA_3117 11485 KOG1110 Putative steroid membrane receptor Hpr6.6/25-Dx - 135 cofit
mRNA_3118 11486 K01881 PARS, proS prolyl-tRNA synthetase + 582 cofit
mRNA_3119 11487 BLAST Spindle pole body protein pcp1 [Hypsizygus marmoreus] - 660 insig.
mRNA_3120 11488 BLAST Protein cps3 [Rhizoctonia solani] - 333 cofit
mRNA_3121 11489 KOG1039 Predicted E3 ubiquitin ligase - 10 cofit