Gene info for mRNA_3090 in Rhodosporidium toruloides IFO0880

mRNA_3090 11458: K03062 PSMC1, RPT2 26S proteasome regulatory subunit T2

Type 1: Protein-coding gene
Located on scaffold scaffold_16, + strand, nucleotides 294,926 to 296,826

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_3085: 11453 - K06269 PPP1C serine/threonine-protein phosphatase PP1 catalytic subunit, at 284368 to 286217 11453 mRNA_3086: 11454 - K03136 TFIIE1, GTF2E1, TFA1, tfe transcription initiation factor TFIIE subunit alpha, at 286949 to 288955 11454 mRNA_3087: 11455 - HMMPfam-haloacid dehalogenase-like hydrolase-PF12710,SUPERFAMILY--SSF56784,TIGRFAM-HAD-SF-IB HAD phosphoserine phosphatase-like hydrolase, family IB-TIGR01488,TIGRFAM-DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase-TIGR01489, at 289552 to 290619 11455 mRNA_3088: 11456 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 290812 to 293862 11456 mRNA_3089: 11457 - BLAST Rho GTPase-activating protein 30 [Larimichthys crocea], at 293855 to 294427 11457 mRNA_3090: 11458 - K03062 PSMC1, RPT2 26S proteasome regulatory subunit T2, at 294926 to 296826 11458 mRNA_3091: 11459 - K13303 SGK2 serum/glucocorticoid-regulated kinase 2, at 296743 to 299433 11459 mRNA_3092: 11460 - KOG4784 Uncharacterized conserved protein, at 300048 to 303992 11460 mRNA_3093: 11461 - Hypothetical Protein, at 304363 to 305282 11461 mRNA_3094: 11462 - HMMPfam-Bestrophin, RFP-TM, chloride channel-PF01062, at 305611 to 307227 11462 mRNA_3095: 11463 - K01739 metB cystathionine gamma-synthase, at 307460 to 310020 11463
Locus Name Description Strand Distance (nt) Phenotype
mRNA_3085 11453 K06269 PPP1C serine/threonine-protein phosphatase PP1 catalytic subunit + cofit
mRNA_3086 11454 K03136 TFIIE1, GTF2E1, TFA1, tfe transcription initiation factor TFIIE subunit alpha - 732 insig.
mRNA_3087 11455 HMMPfam-haloacid dehalogenase-like hydrolase-PF12710,SUPERFAMILY--SSF56784,TIGRFAM-HAD-SF-IB HAD phosphoserine phosphatase-like hydrolase, family IB-TIGR01488,TIGRFAM-DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase-TIGR01489 + 597 cofit
mRNA_3088 11456 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + 193 insig.
mRNA_3089 11457 BLAST Rho GTPase-activating protein 30 [Larimichthys crocea] + -7 cofit
mRNA_3090 11458 K03062 PSMC1, RPT2 26S proteasome regulatory subunit T2 + 499 insig.
mRNA_3091 11459 K13303 SGK2 serum/glucocorticoid-regulated kinase 2 - -83 cofit
mRNA_3092 11460 KOG4784 Uncharacterized conserved protein - 615 cofit
mRNA_3093 11461 Hypothetical Protein - 371 cofit
mRNA_3094 11462 HMMPfam-Bestrophin, RFP-TM, chloride channel-PF01062 - 329 insig.
mRNA_3095 11463 K01739 metB cystathionine gamma-synthase - 233 cofit