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Gene info for mRNA_3048 in
Rhodosporidium toruloides IFO0880
mRNA_3048 11416:
K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7
Type 1: Protein-coding gene
Located on scaffold scaffold_16, + strand, nucleotides 188,658 to 190,471
Links:
MicrobesOnline
Nearby Genes
500 nt
mRNA_3043: 11411 - K18159 NDUFAF1, CIA30 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1, at 175511 to 176675
11411
mRNA_3044: 11412 - K11771 SWI1, ADR6 SWI/SNF chromatin-remodeling complex subunit SWI1, at 177701 to 181469
11412
mRNA_3045: 11413 - Hypothetical Protein, at 182948 to 183820
11413
mRNA_3046: 11414 - Hypothetical Protein, at 184191 to 185834
11414
mRNA_3047: 11415 - K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7, at 186454 to 188264
11415
mRNA_3048: 11416 - K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7, at 188658 to 190471
11416
mRNA_3049: 11417 - SUPERFAMILY--SSF50685, at 190757 to 193605
11417
mRNA_3050: 11418 - K14430 PHO87_91 phosphate transporter, at 193980 to 198261
11418
mRNA_3051: 11419 - Hypothetical Protein, at 198929 to 201085
11419
mRNA_3052: 11420 - KOG2404 Fumarate reductase, flavoprotein subunit, at 201580 to 204661
11420
mRNA_3053: 11421 - K06889 K06889 uncharacterized protein, at 205361 to 206848
11421
Locus
Name
Description
Strand
Distance (nt)
Phenotype
mRNA_3043
11411
K18159 NDUFAF1, CIA30 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1
+
no data
mRNA_3044
11412
K11771 SWI1, ADR6 SWI/SNF chromatin-remodeling complex subunit SWI1
+
1026
cofit
mRNA_3045
11413
Hypothetical Protein
-
1479
cofit
mRNA_3046
11414
Hypothetical Protein
-
371
insig.
mRNA_3047
11415
K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7
+
620
cofit
mRNA_3048
11416
K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7
+
394
insig.
mRNA_3049
11417
SUPERFAMILY--SSF50685
+
286
no data
mRNA_3050
11418
K14430 PHO87_91 phosphate transporter
+
375
no data
mRNA_3051
11419
Hypothetical Protein
+
668
cofit
mRNA_3052
11420
KOG2404 Fumarate reductase, flavoprotein subunit
-
495
cofit
mRNA_3053
11421
K06889 K06889 uncharacterized protein
-
700
cofit