Gene info for mRNA_3003 in Rhodosporidium toruloides IFO0880

mRNA_3003 11371: ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701

Type 1: Protein-coding gene
Located on scaffold scaffold_16, + strand, nucleotides 50,625 to 53,414

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_2998: 11366 - KOG3383 Uncharacterized conserved protein, at 41514 to 42818 11366 mRNA_2999: 11367 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 43195 to 45486 11367 mRNA_3000: 11368 - K15528 FAAH fatty acid amide hydrolase, at 45858 to 47909 11368 mRNA_3001: 11369 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 48202 to 49332 11369 mRNA_3002: 11370 - HMMPfam-Fungal specific transcription factor domain-PF11951, at 49376 to 50038 11370 mRNA_3003: 11371 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 50625 to 53414 11371 mRNA_3004: 11372 - K12624 LSM5 U6 snRNA-associated Sm-like protein LSm5, at 53581 to 54123 11372 mRNA_3005: 11373 - K19708 PTC6, AUP1 protein phosphatase PTC6, at 54754 to 56074 11373 mRNA_3006: 11374 - K03259 EIF4E translation initiation factor 4E, at 56733 to 57511 11374 mRNA_3007: 11375 - K15119 SLC25A39_40 solute carrier family 25, member 39/40, at 57781 to 59867 11375 mRNA_3008: 11376 - HMMPfam-Inositol hexakisphosphate-PF14566,SUPERFAMILY--SSF52799, at 60118 to 65560 11376
Locus Name Description Strand Distance (nt) Phenotype
mRNA_2998 11366 KOG3383 Uncharacterized conserved protein + cofit
mRNA_2999 11367 KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) - 377 cofit
mRNA_3000 11368 K15528 FAAH fatty acid amide hydrolase + 372 cofit
mRNA_3001 11369 ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + 293 insig.
mRNA_3002 11370 HMMPfam-Fungal specific transcription factor domain-PF11951 + 44 cofit
mRNA_3003 11371 ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701 + 587 cofit
mRNA_3004 11372 K12624 LSM5 U6 snRNA-associated Sm-like protein LSm5 - 167 no data
mRNA_3005 11373 K19708 PTC6, AUP1 protein phosphatase PTC6 + 631 cofit
mRNA_3006 11374 K03259 EIF4E translation initiation factor 4E - 659 cofit
mRNA_3007 11375 K15119 SLC25A39_40 solute carrier family 25, member 39/40 + 270 no data
mRNA_3008 11376 HMMPfam-Inositol hexakisphosphate-PF14566,SUPERFAMILY--SSF52799 - 251 insig.