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Gene info for mRNA_2836 in
Rhodosporidium toruloides IFO0880
mRNA_2836 11204:
HMMPfam-Putative zinc finger motif, C2HC5-type-PF06221
Type 1: Protein-coding gene
Located on scaffold scaffold_15, + strand, nucleotides 328,530 to 330,386
Links:
MicrobesOnline
Nearby Genes
500 nt
mRNA_2831: 11199 - HMMPfam-short chain dehydrogenase-PF00106,PRINTS-Glucose/ribitol dehydrogenase family signature-PR00081,SMART--SM00822,SUPERFAMILY--SSF51735, at 318054 to 319183
11199
mRNA_2832: 11200 - KOG1611 Predicted short chain-type dehydrogenase, at 319587 to 320810
11200
mRNA_2833: 11201 - KOG0254 Predicted transporter (major facilitator superfamily), at 321440 to 324159
11201
mRNA_2834: 11202 - K01001 ALG7 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, at 324460 to 326344
11202
mRNA_2835: 11203 - K00022 HADH 3-hydroxyacyl-CoA dehydrogenase, at 326503 to 328205
11203
mRNA_2836: 11204 - HMMPfam-Putative zinc finger motif, C2HC5-type-PF06221, at 328530 to 330386
11204
mRNA_2837: 11205 - KOG4100 Uncharacterized conserved protein, at 330565 to 331429
11205
mRNA_2838: 11206 - K02934 RP-L6e, RPL6 large subunit ribosomal protein L6e, at 331899 to 332766
11206
mRNA_2839: 11207 - K01427 URE urease, at 333745 to 337824
11207
mRNA_2840: 11208 - KOG4178 Soluble epoxide hydrolase, at 338126 to 339492
11208
mRNA_2841: 11209 - KOG3290 Peroxisomal phytanoyl-CoA hydroxylase, at 339851 to 340983
11209
Locus
Name
Description
Strand
Distance (nt)
Phenotype
mRNA_2831
11199
HMMPfam-short chain dehydrogenase-PF00106,PRINTS-Glucose/ribitol dehydrogenase family signature-PR00081,SMART--SM00822,SUPERFAMILY--SSF51735
-
cofit
mRNA_2832
11200
KOG1611 Predicted short chain-type dehydrogenase
-
404
cofit
mRNA_2833
11201
KOG0254 Predicted transporter (major facilitator superfamily)
-
630
insig.
mRNA_2834
11202
K01001 ALG7 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase
+
301
no data
mRNA_2835
11203
K00022 HADH 3-hydroxyacyl-CoA dehydrogenase
+
159
cofit
mRNA_2836
11204
HMMPfam-Putative zinc finger motif, C2HC5-type-PF06221
+
325
cofit
mRNA_2837
11205
KOG4100 Uncharacterized conserved protein
+
179
insig.
mRNA_2838
11206
K02934 RP-L6e, RPL6 large subunit ribosomal protein L6e
-
470
no data
mRNA_2839
11207
K01427 URE urease
-
979
cofit
mRNA_2840
11208
KOG4178 Soluble epoxide hydrolase
+
302
insig.
mRNA_2841
11209
KOG3290 Peroxisomal phytanoyl-CoA hydroxylase
+
359
cofit