Gene info for mRNA_2453 in Rhodosporidium toruloides IFO0880

mRNA_2453 10821: HMMPfam-Fungal cellulose binding domain-PF00734,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180

Type 1: Protein-coding gene
Located on scaffold scaffold_14, - strand, nucleotides 166,755 to 168,701

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_2448: 10816 - Hypothetical Protein, at 157035 to 159573 10816 mRNA_2449: 10817 - KOG1343 Histone deacetylase complex, catalytic component HDA1, at 159950 to 161445 10817 mRNA_2450: 10818 - KOG3037 Cell membrane glycoprotein, at 161540 to 163035 10818 mRNA_2451: 10819 - Hypothetical Protein, at 163388 to 164949 10819 mRNA_2452: 10820 - HMMPfam-Ribonuclease H2 non-catalytic subunit (Ylr154p-like)-PF08615, at 165209 to 166286 10820 mRNA_2453: 10821 - HMMPfam-Fungal cellulose binding domain-PF00734,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180, at 166755 to 168701 10821 mRNA_2454: 10822 - K12823 DDX5, DBP2 ATP-dependent RNA helicase DDX5/DBP2, at 169687 to 172594 10822 mRNA_2455: 10823 - K16912 LAS1 ribosomal biogenesis protein LAS1, at 172733 to 174671 10823 mRNA_2456: 10824 - Hypothetical Protein, at 174898 to 175908 10824 mRNA_2457: 10825 - K10589 UBE3C ubiquitin-protein ligase E3 C, at 177733 to 180454 10825 mRNA_2458: 10826 - K04799 FEN1, RAD2 flap endonuclease-1, at 183785 to 185672 10826
Locus Name Description Strand Distance (nt) Phenotype
mRNA_2448 10816 Hypothetical Protein + insig.
mRNA_2449 10817 KOG1343 Histone deacetylase complex, catalytic component HDA1 + 377 cofit
mRNA_2450 10818 KOG3037 Cell membrane glycoprotein - 95 cofit
mRNA_2451 10819 Hypothetical Protein + 353 cofit
mRNA_2452 10820 HMMPfam-Ribonuclease H2 non-catalytic subunit (Ylr154p-like)-PF08615 + 260 cofit
mRNA_2453 10821 HMMPfam-Fungal cellulose binding domain-PF00734,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180 - 469 cofit
mRNA_2454 10822 K12823 DDX5, DBP2 ATP-dependent RNA helicase DDX5/DBP2 - 986 no data
mRNA_2455 10823 K16912 LAS1 ribosomal biogenesis protein LAS1 + 139 no data
mRNA_2456 10824 Hypothetical Protein - 227 no data
mRNA_2457 10825 K10589 UBE3C ubiquitin-protein ligase E3 C + 1825 cofit
mRNA_2458 10826 K04799 FEN1, RAD2 flap endonuclease-1 + 3331 no data