Gene info for mRNA_2449 in Rhodosporidium toruloides IFO0880

mRNA_2449 10817: KOG1343 Histone deacetylase complex, catalytic component HDA1

Type 1: Protein-coding gene
Located on scaffold scaffold_14, + strand, nucleotides 159,950 to 161,445

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_2444: 10812 - KOG4505 Na+/H+ antiporter, at 145860 to 150269 10812 mRNA_2445: 10813 - HMMPfam-Protein of unknown function (DUF3533)-PF12051, at 151366 to 153133 10813 mRNA_2446: 10814 - K11396 YNG2, EAF4 chromatin modification-related protein YNG2, at 153501 to 155365 10814 mRNA_2447: 10815 - Hypothetical Protein, at 155632 to 156162 10815 mRNA_2448: 10816 - Hypothetical Protein, at 157035 to 159573 10816 mRNA_2449: 10817 - KOG1343 Histone deacetylase complex, catalytic component HDA1, at 159950 to 161445 10817 mRNA_2450: 10818 - KOG3037 Cell membrane glycoprotein, at 161540 to 163035 10818 mRNA_2451: 10819 - Hypothetical Protein, at 163388 to 164949 10819 mRNA_2452: 10820 - HMMPfam-Ribonuclease H2 non-catalytic subunit (Ylr154p-like)-PF08615, at 165209 to 166286 10820 mRNA_2453: 10821 - HMMPfam-Fungal cellulose binding domain-PF00734,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180, at 166755 to 168701 10821 mRNA_2454: 10822 - K12823 DDX5, DBP2 ATP-dependent RNA helicase DDX5/DBP2, at 169687 to 172594 10822
Locus Name Description Strand Distance (nt) Phenotype
mRNA_2444 10812 KOG4505 Na+/H+ antiporter + strong
mRNA_2445 10813 HMMPfam-Protein of unknown function (DUF3533)-PF12051 - 1097 cofit
mRNA_2446 10814 K11396 YNG2, EAF4 chromatin modification-related protein YNG2 - 368 no data
mRNA_2447 10815 Hypothetical Protein + 267 insig.
mRNA_2448 10816 Hypothetical Protein + 873 insig.
mRNA_2449 10817 KOG1343 Histone deacetylase complex, catalytic component HDA1 + 377 cofit
mRNA_2450 10818 KOG3037 Cell membrane glycoprotein - 95 cofit
mRNA_2451 10819 Hypothetical Protein + 353 cofit
mRNA_2452 10820 HMMPfam-Ribonuclease H2 non-catalytic subunit (Ylr154p-like)-PF08615 + 260 cofit
mRNA_2453 10821 HMMPfam-Fungal cellulose binding domain-PF00734,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180 - 469 cofit
mRNA_2454 10822 K12823 DDX5, DBP2 ATP-dependent RNA helicase DDX5/DBP2 - 986 no data