Gene info for mRNA_2187 in Rhodosporidium toruloides IFO0880

mRNA_2187 10555: K09602 OTUB1 ubiquitin thioesterase protein OTUB1

Type 1: Protein-coding gene
Located on scaffold scaffold_13, + strand, nucleotides 291,957 to 293,217

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_2182: 10550 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 282735 to 284065 10550 mRNA_2183: 10551 - K00059 fabG 3-oxoacyl-[acyl-carrier protein] reductase, at 284423 to 286019 10551 mRNA_2184: 10552 - Hypothetical Protein, at 286236 to 287917 10552 mRNA_2185: 10553 - HMMPfam-Copper fist DNA binding domain-PF00649,PRINTS-Copper fist domain signature-PR00617,ProSiteProfiles-Copper-fist DNA-binding domain profile.-PS50073,SMART-Copper-Fist-SM00412,SMART--SM01090,SUPERFAMILY--SSF57879, at 288686 to 288844 10553 mRNA_2186: 10554 - K06316 RFT1 oligosaccharide translocation protein RFT1, at 289914 to 291585 10554 mRNA_2187: 10555 - K09602 OTUB1 ubiquitin thioesterase protein OTUB1, at 291957 to 293217 10555 mRNA_2188: 10556 - Hypothetical Protein, at 294159 to 294788 10556 mRNA_2189: 10557 - K11236 CDC24 cell division control protein 24, at 296049 to 299793 10557 mRNA_2190: 10558 - K00059 fabG 3-oxoacyl-[acyl-carrier protein] reductase, at 301262 to 303174 10558 mRNA_2191: 10559 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048, at 304016 to 306697 10559 mRNA_2192: 10560 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 306918 to 310071 10560
Locus Name Description Strand Distance (nt) Phenotype
mRNA_2182 10550 HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112 + cofit
mRNA_2183 10551 K00059 fabG 3-oxoacyl-[acyl-carrier protein] reductase - 358 cofit
mRNA_2184 10552 Hypothetical Protein + 217 cofit
mRNA_2185 10553 HMMPfam-Copper fist DNA binding domain-PF00649,PRINTS-Copper fist domain signature-PR00617,ProSiteProfiles-Copper-fist DNA-binding domain profile.-PS50073,SMART-Copper-Fist-SM00412,SMART--SM01090,SUPERFAMILY--SSF57879 - 769 cofit
mRNA_2186 10554 K06316 RFT1 oligosaccharide translocation protein RFT1 - 1070 no data
mRNA_2187 10555 K09602 OTUB1 ubiquitin thioesterase protein OTUB1 + 372 cofit
mRNA_2188 10556 Hypothetical Protein + 942 no data
mRNA_2189 10557 K11236 CDC24 cell division control protein 24 + 1261 strong
mRNA_2190 10558 K00059 fabG 3-oxoacyl-[acyl-carrier protein] reductase + 1469 cofit
mRNA_2191 10559 ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048 + 842 cofit
mRNA_2192 10560 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + 221 cofit