Gene info for mRNA_2055 in Rhodosporidium toruloides IFO0880

mRNA_2055 10423: KOG2817 Predicted E3 ubiquitin ligase

Type 1: Protein-coding gene
Located on scaffold scaffold_12, - strand, nucleotides 846,243 to 848,116

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_2050: 10418 - K02725 PSMA1 20S proteasome subunit alpha 6, at 835073 to 836370 10418 mRNA_2051: 10419 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 836699 to 837795 10419 mRNA_2052: 10420 - KOG1399 Flavin-containing monooxygenase, at 838709 to 841749 10420 mRNA_2053: 10421 - KOG2450 Aldehyde dehydrogenase, at 842019 to 844467 10421 mRNA_2054: 10422 - KOG1994 Predicted RNA binding protein, contains G-patch and Zn-finger domains, at 844662 to 846096 10422 mRNA_2055: 10423 - KOG2817 Predicted E3 ubiquitin ligase, at 846243 to 848116 10423 mRNA_2056: 10424 - K11667 INO80C, IES6 INO80 complex subunit C, at 848164 to 849134 10424 mRNA_2057: 10425 - KOG3010 Methyltransferase, at 849514 to 850707 10425 mRNA_2058: 10426 - KOG1128 Uncharacterized conserved protein, contains TPR repeats, at 850790 to 853642 10426 mRNA_2059: 10427 - K13509 AGPAT1_2 lysophosphatidate acyltransferase, at 853881 to 854956 10427 mRNA_2060: 10428 - K05824 LYS12 homoisocitrate dehydrogenase, at 855890 to 857453 10428
Locus Name Description Strand Distance (nt) Phenotype
mRNA_2050 10418 K02725 PSMA1 20S proteasome subunit alpha 6 + no data
mRNA_2051 10419 BLAST expressed protein [Cryptococcus neoformans var. neofo... + 329 cofit
mRNA_2052 10420 KOG1399 Flavin-containing monooxygenase + 914 insig.
mRNA_2053 10421 KOG2450 Aldehyde dehydrogenase + 270 cofit
mRNA_2054 10422 KOG1994 Predicted RNA binding protein, contains G-patch and Zn-finger domains + 195 cofit
mRNA_2055 10423 KOG2817 Predicted E3 ubiquitin ligase - 147 strong
mRNA_2056 10424 K11667 INO80C, IES6 INO80 complex subunit C + 48 cofit
mRNA_2057 10425 KOG3010 Methyltransferase + 380 cofit
mRNA_2058 10426 KOG1128 Uncharacterized conserved protein, contains TPR repeats - 83 no data
mRNA_2059 10427 K13509 AGPAT1_2 lysophosphatidate acyltransferase - 239 no data
mRNA_2060 10428 K05824 LYS12 homoisocitrate dehydrogenase - 934 strong