Gene mRNA_1990 in Rhodosporidium toruloides IFO0880

mRNA_1990 10358: HMMPfam-PPR repeat-PF01535,HMMPfam-Pentatricopeptide repeat domain-PF13812,ProSiteProfiles-Pentatricopeptide (PPR) repeat profile.-PS51375,TIGRFAM-PPR pentatricopeptide repeat domain-TIGR00756 in Rhodosporidium toruloides IFO0880

Type 1: Protein-coding gene
Located on scaffold scaffold_12, + strand, nucleotides 684,324 to 686,633

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_1985: 10353 - Hypothetical Protein, at 672578 to 672870 10353 mRNA_1986: 10354 - KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif, at 673978 to 676416 10354 mRNA_1987: 10355 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 677107 to 679198 10355 mRNA_1988: 10356 - KOG1674 Cyclin, at 679258 to 681059 10356 mRNA_1989: 10357 - KOG0551 Hsp90 co-chaperone CNS1 (contains TPR repeats), at 682690 to 684207 10357 mRNA_1990: 10358 - HMMPfam-PPR repeat-PF01535,HMMPfam-Pentatricopeptide repeat domain-PF13812,ProSiteProfiles-Pentatricopeptide (PPR) repeat profile.-PS51375,TIGRFAM-PPR pentatricopeptide repeat domain-TIGR00756, at 684324 to 686633 10358 mRNA_1991: 10359 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 687558 to 690393 10359 mRNA_1992: 10360 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 690779 to 693096 10360 mRNA_1993: 10361 - Hypothetical Protein, at 694051 to 694539 10361 mRNA_1994: 10362 - K03235 EF3, TEF3 elongation factor 3, at 695063 to 698759 10362 mRNA_1995: 10363 - KOG0062 ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b, at 699690 to 700377 10363
Locus Name Description Strand Distance (nt) Phenotype
mRNA_1985 10353 Hypothetical Protein - no data
mRNA_1986 10354 KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif + 1108 no data
mRNA_1987 10355 KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) + 691 cofit
mRNA_1988 10356 KOG1674 Cyclin - 60 insig.
mRNA_1989 10357 KOG0551 Hsp90 co-chaperone CNS1 (contains TPR repeats) - 1631 no data
mRNA_1990 10358 HMMPfam-PPR repeat-PF01535,HMMPfam-Pentatricopeptide repeat domain-PF13812,ProSiteProfiles-Pentatricopeptide (PPR) repeat profile.-PS51375,TIGRFAM-PPR pentatricopeptide repeat domain-TIGR00756 + 117 no data
mRNA_1991 10359 K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family + 925 cofit
mRNA_1992 10360 BLAST protein of unknown function [Taphrina deformans PYCC ... - 386 cofit
mRNA_1993 10361 Hypothetical Protein + 955 cofit
mRNA_1994 10362 K03235 EF3, TEF3 elongation factor 3 + 524 no data
mRNA_1995 10363 KOG0062 ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b + 931 cofit