Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Gene info for mRNA_1955 in
Rhodosporidium toruloides IFO0880
mRNA_1955 10323:
KOG0379 Kelch repeat-containing proteins
Type 1: Protein-coding gene
Located on scaffold scaffold_12, - strand, nucleotides 603,461 to 605,817
Links:
MicrobesOnline
Nearby Genes
500 nt
mRNA_1950: 10318 - K03965 NDUFB9 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9, at 586825 to 587644
10318
mRNA_1951: 10319 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 588151 to 591426
10319
mRNA_1952: 10320 - K14564 NOP56 nucleolar protein 56, at 591804 to 593975
10320
mRNA_1953: 10321 - K18442 ARFGEF, BIG brefeldin A-inhibited guanine nucleotide-exchange protein, at 594483 to 601309
10321
mRNA_1954: 10322 - Hypothetical Protein, at 601425 to 602462
10322
mRNA_1955: 10323 - KOG0379 Kelch repeat-containing proteins, at 603461 to 605817
10323
mRNA_1956: 10324 - BLAST 40S ribosomal protein S1 [Exophiala sideris], at 606971 to 607614
10324
mRNA_1957: 10325 - K02984 RP-S3Ae, RPS3A small subunit ribosomal protein S3Ae, at 607981 to 609583
10325
mRNA_1958: 10326 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 610306 to 612524
10326
mRNA_1959: 10327 - Hypothetical Protein, at 613200 to 613373
10327
mRNA_1960: 10328 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 613593 to 615935
10328
Locus
Name
Description
Strand
Distance (nt)
Phenotype
mRNA_1950
10318
K03965 NDUFB9 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9
+
no data
mRNA_1951
10319
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
+
507
cofit
mRNA_1952
10320
K14564 NOP56 nucleolar protein 56
-
378
no data
mRNA_1953
10321
K18442 ARFGEF, BIG brefeldin A-inhibited guanine nucleotide-exchange protein
+
508
no data
mRNA_1954
10322
Hypothetical Protein
-
116
cofit
mRNA_1955
10323
KOG0379 Kelch repeat-containing proteins
-
999
cofit
mRNA_1956
10324
BLAST 40S ribosomal protein S1 [Exophiala sideris]
-
1154
cofit
mRNA_1957
10325
K02984 RP-S3Ae, RPS3A small subunit ribosomal protein S3Ae
+
367
no data
mRNA_1958
10326
KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily)
-
723
cofit
mRNA_1959
10327
Hypothetical Protein
-
676
no data
mRNA_1960
10328
KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily)
-
220
insig.