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Gene info for mRNA_1886 in
Rhodosporidium toruloides IFO0880
mRNA_1886 10254:
KOG1470 Phosphatidylinositol transfer protein PDR16 and related proteins
Type 1: Protein-coding gene
Located on scaffold scaffold_12, - strand, nucleotides 436,589 to 438,730
Links:
MicrobesOnline
Nearby Genes
500 nt
mRNA_1881: 10249 - K11770 SFH1 chromatin structure-remodeling complex subunit SFH1, at 426689 to 428081
10249
mRNA_1882: 10250 - HMMPfam-S4 domain-PF01479,ProSitePatterns-Ribosomal protein S4 signature.-PS00632,ProSiteProfiles-S4 RNA-binding domain profile.-PS50889,SMART-S4 RNA-binding domain-SM00363,SUPERFAMILY--SSF55174, at 428761 to 429844
10250
mRNA_1883: 10251 - KOG2665 Predicted FAD-dependent oxidoreductase, at 430168 to 431962
10251
mRNA_1884: 10252 - Hypothetical Protein, at 432578 to 433282
10252
mRNA_1885: 10253 - KOG1238 Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family), at 433544 to 436141
10253
mRNA_1886: 10254 - KOG1470 Phosphatidylinositol transfer protein PDR16 and related proteins, at 436589 to 438730
10254
mRNA_1887: 10255 - K14823 EBP2, EBNA1BP2 rRNA-processing protein EBP2, at 439280 to 440428
10255
mRNA_1888: 10256 - HMMPfam-Protein of unknown function (DUF2423)-PF10338, at 441171 to 441971
10256
mRNA_1889: 10257 - Hypothetical Protein, at 442061 to 442321
10257
mRNA_1890: 10258 - Hypothetical Protein, at 442391 to 442819
10258
mRNA_1891: 10259 - K03083 GSK3B glycogen synthase kinase 3 beta, at 443414 to 444929
10259
Locus
Name
Description
Strand
Distance (nt)
Phenotype
mRNA_1881
10249
K11770 SFH1 chromatin structure-remodeling complex subunit SFH1
-
no data
mRNA_1882
10250
HMMPfam-S4 domain-PF01479,ProSitePatterns-Ribosomal protein S4 signature.-PS00632,ProSiteProfiles-S4 RNA-binding domain profile.-PS50889,SMART-S4 RNA-binding domain-SM00363,SUPERFAMILY--SSF55174
-
680
no data
mRNA_1883
10251
KOG2665 Predicted FAD-dependent oxidoreductase
-
324
cofit
mRNA_1884
10252
Hypothetical Protein
+
616
cofit
mRNA_1885
10253
KOG1238 Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family)
-
262
insig.
mRNA_1886
10254
KOG1470 Phosphatidylinositol transfer protein PDR16 and related proteins
-
448
cofit
mRNA_1887
10255
K14823 EBP2, EBNA1BP2 rRNA-processing protein EBP2
-
550
no data
mRNA_1888
10256
HMMPfam-Protein of unknown function (DUF2423)-PF10338
+
743
cofit
mRNA_1889
10257
Hypothetical Protein
-
90
cofit
mRNA_1890
10258
Hypothetical Protein
+
70
cofit
mRNA_1891
10259
K03083 GSK3B glycogen synthase kinase 3 beta
+
595
cofit