Gene mRNA_1882 in Rhodosporidium toruloides IFO0880

mRNA_1882 10250: HMMPfam-S4 domain-PF01479,ProSitePatterns-Ribosomal protein S4 signature.-PS00632,ProSiteProfiles-S4 RNA-binding domain profile.-PS50889,SMART-S4 RNA-binding domain-SM00363,SUPERFAMILY--SSF55174 in Rhodosporidium toruloides IFO0880

Type 1: Protein-coding gene
Located on scaffold scaffold_12, - strand, nucleotides 428,761 to 429,844

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_1877: 10245 - K03363 CDC20 cell division cycle 20, cofactor of APC complex, at 418587 to 420557 10245 mRNA_1878: 10246 - K01875 SARS, serS seryl-tRNA synthetase, at 420852 to 422750 10246 mRNA_1879: 10247 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 423115 to 424156 10247 mRNA_1880: 10248 - KOG0254 Predicted transporter (major facilitator superfamily), at 424298 to 426105 10248 mRNA_1881: 10249 - K11770 SFH1 chromatin structure-remodeling complex subunit SFH1, at 426689 to 428081 10249 mRNA_1882: 10250 - HMMPfam-S4 domain-PF01479,ProSitePatterns-Ribosomal protein S4 signature.-PS00632,ProSiteProfiles-S4 RNA-binding domain profile.-PS50889,SMART-S4 RNA-binding domain-SM00363,SUPERFAMILY--SSF55174, at 428761 to 429844 10250 mRNA_1883: 10251 - KOG2665 Predicted FAD-dependent oxidoreductase, at 430168 to 431962 10251 mRNA_1884: 10252 - Hypothetical Protein, at 432578 to 433282 10252 mRNA_1885: 10253 - KOG1238 Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family), at 433544 to 436141 10253 mRNA_1886: 10254 - KOG1470 Phosphatidylinositol transfer protein PDR16 and related proteins, at 436589 to 438730 10254 mRNA_1887: 10255 - K14823 EBP2, EBNA1BP2 rRNA-processing protein EBP2, at 439280 to 440428 10255
Locus Name Description Strand Distance (nt) Phenotype
mRNA_1877 10245 K03363 CDC20 cell division cycle 20, cofactor of APC complex + no data
mRNA_1878 10246 K01875 SARS, serS seryl-tRNA synthetase - 295 no data
mRNA_1879 10247 HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232 + 365 cofit
mRNA_1880 10248 KOG0254 Predicted transporter (major facilitator superfamily) - 142 cofit
mRNA_1881 10249 K11770 SFH1 chromatin structure-remodeling complex subunit SFH1 - 584 no data
mRNA_1882 10250 HMMPfam-S4 domain-PF01479,ProSitePatterns-Ribosomal protein S4 signature.-PS00632,ProSiteProfiles-S4 RNA-binding domain profile.-PS50889,SMART-S4 RNA-binding domain-SM00363,SUPERFAMILY--SSF55174 - 680 no data
mRNA_1883 10251 KOG2665 Predicted FAD-dependent oxidoreductase - 324 cofit
mRNA_1884 10252 Hypothetical Protein + 616 cofit
mRNA_1885 10253 KOG1238 Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family) - 262 insig.
mRNA_1886 10254 KOG1470 Phosphatidylinositol transfer protein PDR16 and related proteins - 448 cofit
mRNA_1887 10255 K14823 EBP2, EBNA1BP2 rRNA-processing protein EBP2 - 550 no data