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Gene info for mRNA_1646 in
Rhodosporidium toruloides IFO0880
mRNA_1646 10014:
KOG2182 Hydrolytic enzymes of the alpha/beta hydrolase fold
Type 1: Protein-coding gene
Located on scaffold scaffold_11, + strand, nucleotides 796,005 to 798,167
Links:
MicrobesOnline
Nearby Genes
500 nt
mRNA_1641: 10009 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 785580 to 788144
10009
mRNA_1642: 10010 - K03937 NDUFS4 NADH dehydrogenase (ubiquinone) Fe-S protein 4, at 788752 to 789941
10010
mRNA_1643: 10011 - KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif, at 790426 to 792624
10011
mRNA_1644: 10012 - K00253 IVD, ivd isovaleryl-CoA dehydrogenase, at 792797 to 794915
10012
mRNA_1645: 10013 - Hypothetical Protein, at 795092 to 795670
10013
mRNA_1646: 10014 - KOG2182 Hydrolytic enzymes of the alpha/beta hydrolase fold, at 796005 to 798167
10014
mRNA_1647: 10015 - K02930 RP-L4e, RPL4 large subunit ribosomal protein L4e, at 800171 to 801820
10015
mRNA_1648: 10016 - K11436 PRMT3 type I protein arginine methyltransferase, at 802282 to 804374
10016
mRNA_1649: 10017 - KOG2495 NADH-dehydrogenase (ubiquinone), at 804506 to 806689
10017
mRNA_1650: 10018 - KOG0254 Predicted transporter (major facilitator superfamily), at 807576 to 811155
10018
mRNA_1651: 10019 - SUPERFAMILY--SSF69047, at 811349 to 811874
10019
Locus
Name
Description
Strand
Distance (nt)
Phenotype
mRNA_1641
10009
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
-
cofit
mRNA_1642
10010
K03937 NDUFS4 NADH dehydrogenase (ubiquinone) Fe-S protein 4
+
608
cofit
mRNA_1643
10011
KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif
+
485
cofit
mRNA_1644
10012
K00253 IVD, ivd isovaleryl-CoA dehydrogenase
+
173
cofit
mRNA_1645
10013
Hypothetical Protein
+
177
no data
mRNA_1646
10014
KOG2182 Hydrolytic enzymes of the alpha/beta hydrolase fold
+
335
cofit
mRNA_1647
10015
K02930 RP-L4e, RPL4 large subunit ribosomal protein L4e
-
2004
no data
mRNA_1648
10016
K11436 PRMT3 type I protein arginine methyltransferase
+
462
no data
mRNA_1649
10017
KOG2495 NADH-dehydrogenase (ubiquinone)
-
132
cofit
mRNA_1650
10018
KOG0254 Predicted transporter (major facilitator superfamily)
+
887
cofit
mRNA_1651
10019
SUPERFAMILY--SSF69047
-
194
insig.