Gene info for mRNA_1643 in Rhodosporidium toruloides IFO0880

mRNA_1643 10011: KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif

Type 1: Protein-coding gene
Located on scaffold scaffold_11, + strand, nucleotides 790,426 to 792,624

Links: MicrobesOnline

Nearby Genes

500 nt mRNA_1638: 10006 - K11807 WDTC1 WD and tetratricopeptide repeats protein 1, at 776391 to 779009 10006 mRNA_1639: 10007 - K00164 OGDH, sucA 2-oxoglutarate dehydrogenase E1 component, at 779505 to 783057 10007 mRNA_1640: 10008 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 783774 to 785106 10008 mRNA_1641: 10009 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 785580 to 788144 10009 mRNA_1642: 10010 - K03937 NDUFS4 NADH dehydrogenase (ubiquinone) Fe-S protein 4, at 788752 to 789941 10010 mRNA_1643: 10011 - KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif, at 790426 to 792624 10011 mRNA_1644: 10012 - K00253 IVD, ivd isovaleryl-CoA dehydrogenase, at 792797 to 794915 10012 mRNA_1645: 10013 - Hypothetical Protein, at 795092 to 795670 10013 mRNA_1646: 10014 - KOG2182 Hydrolytic enzymes of the alpha/beta hydrolase fold, at 796005 to 798167 10014 mRNA_1647: 10015 - K02930 RP-L4e, RPL4 large subunit ribosomal protein L4e, at 800171 to 801820 10015 mRNA_1648: 10016 - K11436 PRMT3 type I protein arginine methyltransferase, at 802282 to 804374 10016
Locus Name Description Strand Distance (nt) Phenotype
mRNA_1638 10006 K11807 WDTC1 WD and tetratricopeptide repeats protein 1 - cofit
mRNA_1639 10007 K00164 OGDH, sucA 2-oxoglutarate dehydrogenase E1 component - 496 no data
mRNA_1640 10008 KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - 717 cofit
mRNA_1641 10009 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 - 474 cofit
mRNA_1642 10010 K03937 NDUFS4 NADH dehydrogenase (ubiquinone) Fe-S protein 4 + 608 cofit
mRNA_1643 10011 KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif + 485 cofit
mRNA_1644 10012 K00253 IVD, ivd isovaleryl-CoA dehydrogenase + 173 cofit
mRNA_1645 10013 Hypothetical Protein + 177 no data
mRNA_1646 10014 KOG2182 Hydrolytic enzymes of the alpha/beta hydrolase fold + 335 cofit
mRNA_1647 10015 K02930 RP-L4e, RPL4 large subunit ribosomal protein L4e - 2004 no data
mRNA_1648 10016 K11436 PRMT3 type I protein arginine methyltransferase + 462 no data