Top cofit genes for mRNA_1560 from Rhodosporidium toruloides IFO0880

mRNA_1560 9928 : HMMPfam-Bromodomain-PF00439,ProSiteProfiles-Bromodomain profile.-PS50014,SMART-bromo domain-SM00297,SUPERFAMILY--SSF47370

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_7457 15825 Hypothetical Protein no 0.87
2 mRNA_2319 10687 KOG3872 FOG FHA domain no 0.86
3 mRNA_263 8631 K01537 E3.6.3.8 Ca2+-transporting ATPase no 0.85
4 mRNA_2235 10603 K11843 USP14, UBP6 ubiquitin carboxyl-terminal hydrolase 14 no 0.83
5 mRNA_748 9116 Hypothetical Protein no 0.82
6 mRNA_8173 16541 HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316 no 0.82
7 mRNA_6262 14630 SMART-Gelsolin homology domain-SM00262,SUPERFAMILY--SSF55753 no 0.81
8 mRNA_4941 13309 K12608 CAF16 CCR4-NOT complex subunit CAF16 no 0.81
9 mRNA_7009 15377 Hypothetical Protein no 0.81
10 mRNA_817 9185 K02208 CDK8_11 cyclin-dependent kinase 8/11 no 0.81
11 mRNA_122 8490 HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,SUPERFAMILY--SSF50685 no 0.81
12 mRNA_297 8665 Hypothetical Protein no 0.81
13 mRNA_1415 9783 Hypothetical Protein no 0.80
14 mRNA_3362 11730 BLAST vacuolar assembly/sorting protein DID2 [Moesziomyces ... no 0.79
15 mRNA_1538 9906 K20307 TRAPPC10, TRS130 trafficking protein particle complex subunit 10 no 0.79
16 mRNA_5042 13410 K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2 no 0.79
17 mRNA_6956 15324 K00720 UGCG ceramide glucosyltransferase no 0.79
18 mRNA_7959 16327 HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232 no 0.78
19 mRNA_3504 11872 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.78
20 mRNA_6871 15239 K17600 VPS54 vacuolar protein sorting-associated protein 54 no 0.78