Top cofit genes for mRNA_1550 from Rhodosporidium toruloides IFO0880

mRNA_1550 9918 : HMMPfam-Methyltransferase domain-PF13489,SUPERFAMILY--SSF53335

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_1417 9785 K01567 pdaA peptidoglycan-N-acetylmuramic acid deacetylase no 0.74
2 mRNA_2483 10851 K17541 SCYL2 SCY1-like protein 2 no 0.71
3 mRNA_2847 11215 ProSitePatterns-Zinc finger RING-type signature.-PS00518 no 0.70
4 mRNA_4695 13063 K11251 H2A histone H2A no 0.68
5 mRNA_7629 15997 K20474 RINT1, TIP20 RAD50-interacting protein 1 no 0.68
6 mRNA_7348 15716 KOG0364 Chaperonin complex component, TCP-1 gamma subunit (CCT3) no 0.67
7 mRNA_3361 11729 K11247 SH3GL endophilin-A no 0.66
8 mRNA_1531 9899 KOG1852 Cell cycle-associated protein no 0.65
9 mRNA_5922 14290 KOG2615 Permease of the major facilitator superfamily no 0.65
10 mRNA_3077 11445 K07542 PIGV phosphatidylinositol glycan, class V no 0.64
11 mRNA_7490 15858 K20167 TBC1D14 TBC1 domain family member 14 no 0.63
12 mRNA_4563 12931 KOG1601 GATA-4/5/6 transcription factors no 0.63
13 mRNA_5894 14262 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701 no 0.62
14 mRNA_5247 13615 HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959 no 0.62
15 mRNA_7543 15911 KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) no 0.61
16 mRNA_7891 16259 Hypothetical Protein no 0.61
17 mRNA_2 8370 PRINTS-Proline rich extensin signature-PR01217 no 0.60
18 mRNA_5297 13665 Hypothetical Protein no 0.60
19 mRNA_5546 13914 Hypothetical Protein no 0.60
20 mRNA_8275 16643 K00102 dld, LDHD D-lactate dehydrogenase (cytochrome) no 0.60