Top cofit genes for mRNA_1452 from Rhodosporidium toruloides IFO0880

mRNA_1452 9820 : K07241 nixA high-affinity nickel-transport protein

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_8370 16738 K12525 metL bifunctional aspartokinase / homoserine dehydrogenase 2 no 0.76
2 mRNA_5149 13517 Hypothetical Protein no 0.71
3 mRNA_2800 11168 SUPERFAMILY--SSF52047 no 0.70
4 mRNA_8329 16697 KOG0527 HMG-box transcription factor no 0.69
5 mRNA_3143 11511 K10133 TP53I3 tumor protein p53-inducible protein 3 no 0.69
6 mRNA_5699 14067 HMMPfam-Vault protein inter-alpha-trypsin domain-PF08487,HMMPfam-von Willebrand factor type A domain-PF13768,ProSiteProfiles-VWFA domain profile.-PS50234,ProSiteProfiles-VIT domain profile.-PS51468,SMART-von Willebrand factor (vWF) type A domain-SM00327,SMART-Vault protein Inter-alpha-Trypsin domain-SM00609,SUPERFAMILY--SSF53300 no 0.67
7 mRNA_7860 16228 HMMPfam-Diacylglycerol kinase catalytic domain-PF00781,ProSiteProfiles-DAG-kinase catalytic (DAGKc) domain profile.-PS50146,SUPERFAMILY--SSF111331 no 0.66
8 mRNA_2344 10712 Hypothetical Protein no 0.66
9 mRNA_5637 14005 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.65
10 mRNA_3203 11571 Hypothetical Protein no 0.65
11 mRNA_5335 13703 HMMPfam-Domain of unknown function (DUF4202)-PF13875 no 0.65
12 mRNA_5208 13576 Hypothetical Protein no 0.64
13 mRNA_3399 11767 KOG0733 Nuclear AAA ATPase (VCP subfamily) no 0.64
14 mRNA_8021 16389 HMMPfam-NAD(P)-binding Rossmann-like domain-PF13450,SUPERFAMILY--SSF51905 no 0.63
15 mRNA_631 8999 Hypothetical Protein no 0.63
16 mRNA_6702 15070 K08192 DAL MFS transporter, ACS family, allantoate permease no 0.63
17 mRNA_6231 14599 KOG2358 NifU-like domain-containing proteins no 0.62
18 mRNA_7647 16015 KOG2741 Dimeric dihydrodiol dehydrogenase no 0.62
19 mRNA_8231 16599 KOG0927 Predicted transporter (ABC superfamily) no 0.61
20 mRNA_3589 11957 HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF101908,SUPERFAMILY--SSF81383 no 0.61