Top cofit genes for mRNA_1356 from Rhodosporidium toruloides IFO0880

mRNA_1356 9724 : HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_4925 13293 ProSiteProfiles-WW/rsp5/WWP domain profile.-PS50020,SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045 no 0.81
2 mRNA_1214 9582 Hypothetical Protein no 0.79
3 mRNA_2449 10817 KOG1343 Histone deacetylase complex, catalytic component HDA1 no 0.78
4 mRNA_5850 14218 HMMPfam-2OG-Fe(II) oxygenase superfamily-PF03171,HMMPfam-non-haem dioxygenase in morphine synthesis N-terminal-PF14226,ProSiteProfiles-Fe(2+) 2-oxoglutarate dioxygenase domain profile.-PS51471,SUPERFAMILY--SSF51197 no 0.78
5 mRNA_8289 16657 KOG1601 GATA-4/5/6 transcription factors no 0.77
6 mRNA_1684 10052 Hypothetical Protein no 0.76
7 mRNA_1508 9876 KOG3140 Predicted membrane protein no 0.76
8 mRNA_1569 9937 KOG3114 Uncharacterized conserved protein no 0.76
9 mRNA_1766 10134 K03097 CSNK2A casein kinase II subunit alpha no 0.76
10 mRNA_8087 16455 ProSiteProfiles-BRCT domain profile.-PS50172,SUPERFAMILY--SSF52113 no 0.75
11 mRNA_515 8883 Hypothetical Protein no 0.75
12 mRNA_7392 15760 Hypothetical Protein no 0.74
13 mRNA_4142 12510 Hypothetical Protein no 0.74
14 mRNA_8483 16851 BLAST GA28568 gene product from transcript GA28568-RA [Rhiz... no 0.72
15 mRNA_2683 11051 K07300 chaA, CAX Ca2+-H+ antiporter no 0.72
16 mRNA_3705 12073 Hypothetical Protein no 0.72
17 mRNA_5934 14302 HMMPfam-Mitochondrial carrier protein-PF00153,ProSiteProfiles-Solute carrier (Solcar) repeat profile.-PS50920,SUPERFAMILY--SSF103506 no 0.72
18 mRNA_2401 10769 HMMPfam-von Willebrand factor type A domain-PF13519,ProSiteProfiles-VWFA domain profile.-PS50234,SMART-von Willebrand factor (vWF) type A domain-SM00327,SUPERFAMILY--SSF53300 no 0.71
19 mRNA_4909 13277 KOG1339 Aspartyl protease no 0.71
20 mRNA_1176 9544 Hypothetical Protein no 0.71