Top cofit genes for mRNA_1227 from Rhodosporidium toruloides IFO0880

mRNA_1227 9595 : KOG1318 Helix loop helix transcription factor EB

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_1817 10185 HMMPfam-Ring finger domain-PF13639,ProSitePatterns-EGF-like domain signature 1.-PS00022,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger SWIM-type profile.-PS50966,SUPERFAMILY--SSF57850 no 0.78
2 mRNA_2543 10911 Hypothetical Protein no 0.77
3 mRNA_5990 14358 Hypothetical Protein no 0.75
4 mRNA_2484 10852 K11498 CENPE centromeric protein E no 0.75
5 mRNA_2614 10982 K18050 PRKCE novel protein kinase C epsilon type no 0.74
6 mRNA_1928 10296 Hypothetical Protein no 0.73
7 mRNA_465 8833 K10858 PMS2 DNA mismatch repair protein PMS2 no 0.73
8 mRNA_4437 12805 KOG4629 Predicted mechanosensitive ion channel no 0.72
9 mRNA_3139 11507 HMMPfam-Acetyltransferase (GNAT) domain-PF13302,SUPERFAMILY--SSF55729 no 0.72
10 mRNA_5985 14353 Hypothetical Protein no 0.71
11 mRNA_1777 10145 BLAST expressed protein [Cryptococcus neoformans var. neofo... no 0.71
12 mRNA_2424 10792 KOG1605 TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) no 0.71
13 mRNA_1241 9609 K12893 SFRS4_5_6 splicing factor, arginine/serine-rich 4/5/6 no 0.69
14 mRNA_445 8813 K03768 PPIB, ppiB peptidyl-prolyl cis-trans isomerase B (cyclophilin B) no 0.69
15 mRNA_2427 10795 Hypothetical Protein no 0.69
16 mRNA_2685 11053 Hypothetical Protein no 0.69
17 mRNA_5382 13750 Hypothetical Protein no 0.68
18 mRNA_6128 14496 BLAST DEHA2B11858p [Debaryomyces hansenii CBS767] no 0.68
19 mRNA_8144 16512 HMMPfam-Domain of unknown function (DUF3506)-PF12014,HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383 no 0.68
20 mRNA_2230 10598 HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SMART-Serine/Threonine protein kinases, catalytic domain-SM00220,SUPERFAMILY--SSF56112 no 0.67