Top cofit genes for mRNA_1218 from Rhodosporidium toruloides IFO0880

mRNA_1218 9586 : SUPERFAMILY--SSF52047

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_8077 16445 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.88
2 mRNA_5717 14085 K20524 LSB5 LAS seventeen-binding protein 5 no 0.86
3 mRNA_7411 15779 K02537 MAD2 mitotic spindle assembly checkpoint protein MAD2 no 0.85
4 mRNA_308 8676 K07952 ARFRP1 ADP-ribosylation factor related protein 1 no 0.85
5 mRNA_1071 9439 K18757 LARP1 la-related protein 1 no 0.82
6 mRNA_58 8426 HMMPfam-Arrestin (or S-antigen), N-terminal domain-PF00339,SUPERFAMILY--SSF81296 no 0.81
7 mRNA_2804 11172 K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2 no 0.80
8 mRNA_5195 13563 KOG0814 Glyoxylase no 0.79
9 mRNA_7178 15546 KOG0417 Ubiquitin-protein ligase no 0.79
10 mRNA_1879 10247 HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232 no 0.79
11 mRNA_7818 16186 K10865 MRE11 double-strand break repair protein MRE11 no 0.79
12 mRNA_7306 15674 KOG1217 Fibrillins and related proteins containing Ca2+-binding EGF-like domains no 0.78
13 mRNA_8398 16766 HMMPfam-Histone deacetylation protein Rxt3-PF08642 no 0.78
14 mRNA_1245 9613 HMMPfam-Magnesium transporter NIPA-PF05653,SUPERFAMILY--SSF103481 no 0.77
15 mRNA_1500 9868 K05770 TSPO, BZRP benzodiazapine receptor no 0.77
16 mRNA_7489 15857 K12351 SMPD2 sphingomyelin phosphodiesterase 2 no 0.77
17 mRNA_2441 10809 KOG1284 Bifunctional GTP cyclohydrolase II/3,4-dihydroxy-2butanone-4-phosphate synthase no 0.77
18 mRNA_1355 9723 SUPERFAMILY--SSF50685 no 0.76
19 mRNA_3284 11652 BLAST something about silencing, SAS, complex subunit 4 [Rh... no 0.75
20 mRNA_3375 11743 Hypothetical Protein no 0.75