Top cofit genes for mRNA_1143 from Rhodosporidium toruloides IFO0880

mRNA_1143 9511 : HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5367 13735 K08838 STK24_25_MST4 serine/threonine-protein kinase 24/25/MST4 no 0.76
2 mRNA_5868 14236 HMMPfam-2OG-Fe(II) oxygenase superfamily-PF03171,HMMPfam-non-haem dioxygenase in morphine synthesis N-terminal-PF14226,PRINTS-Isopenicillin N synthase signature-PR00682,ProSiteProfiles-Fe(2+) 2-oxoglutarate dioxygenase domain profile.-PS51471,SUPERFAMILY--SSF51197 no 0.75
3 mRNA_5393 13761 KOG0603 Ribosomal protein S6 kinase no 0.74
4 mRNA_2171 10539 K06877 K06877 DEAD/DEAH box helicase domain-containing protein no 0.73
5 mRNA_5364 13732 KOG1630 Growth hormone-induced protein and related proteins no 0.73
6 mRNA_6447 14815 Hypothetical Protein no 0.70
7 mRNA_1551 9919 HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240 no 0.69
8 mRNA_2947 11315 Hypothetical Protein no 0.69
9 mRNA_4678 13046 K11252 H2B histone H2B no 0.69
10 mRNA_4799 13167 K05676 ABCD2, ALDL1 ATP-binding cassette, subfamily D (ALD), member 2 no 0.68
11 mRNA_3539 11907 K12663 ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase no 0.68
12 mRNA_1705 10073 K03264 EIF6 translation initiation factor 6 no 0.67
13 mRNA_6093 14461 HMMPfam-Permease for cytosine/purines, uracil, thiamine, allantoin-PF02133,PIRSF--PIRSF002744 no 0.66
14 mRNA_684 9052 HMMPfam-Nucleotide-diphospho-sugar transferase-PF03407 no 0.66
15 mRNA_1767 10135 HMMPfam-F-box-like-PF12937 no 0.65
16 mRNA_1722 10090 KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily no 0.65
17 mRNA_3575 11943 Hypothetical Protein no 0.64
18 mRNA_6150 14518 KOG3399 Predicted Yippee-type zinc-binding protein no 0.64
19 mRNA_2503 10871 SUPERFAMILY--SSF63829 no 0.64
20 mRNA_8081 16449 K00905 BCKDK [3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase no 0.63