Top cofit genes for mRNA_1139 from Rhodosporidium toruloides IFO0880

mRNA_1139 9507 : KOG0948 Nuclear exosomal RNA helicase MTR4, DEAD-box superfamily

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5541 13909 K02482 K02482 two-component system, NtrC family, sensor kinase no 0.73
2 mRNA_1732 10100 Hypothetical Protein no 0.73
3 mRNA_790 9158 HMMPfam-C2 domain-PF00168,ProSiteProfiles-C2 domain profile.-PS50004,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562 no 0.72
4 mRNA_6771 15139 Hypothetical Protein no 0.71
5 mRNA_21 8389 SUPERFAMILY--SSF51045 no 0.71
6 mRNA_5766 14134 SUPERFAMILY--SSF52058 no 0.70
7 mRNA_7106 15474 K11313 SUPT3H, SPT3 transcription initiation protein SPT3 no 0.70
8 mRNA_3240 11608 Hypothetical Protein no 0.70
9 mRNA_5519 13887 HMMPfam-TRAF-type zinc finger-PF02176,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145 no 0.70
10 mRNA_1760 10128 KOG0940 Ubiquitin protein ligase RSP5/NEDD4 no 0.70
11 mRNA_4017 12385 K13333 PLB lysophospholipase no 0.69
12 mRNA_2124 10492 Hypothetical Protein no 0.69
13 mRNA_8219 16587 K15202 GTF3C5, TFC1 general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) no 0.69
14 mRNA_8458 16826 Hypothetical Protein no 0.69
15 mRNA_596 8964 Hypothetical Protein no 0.69
16 mRNA_4734 13102 Hypothetical Protein no 0.68
17 mRNA_7539 15907 K07300 chaA, CAX Ca2+-H+ antiporter no 0.67
18 mRNA_5427 13795 Hypothetical Protein no 0.67
19 mRNA_59 8427 Hypothetical Protein no 0.67
20 mRNA_8416 16784 BLAST Protein byr4 [Hypsizygus marmoreus] no 0.66