Top cofit genes for mRNA_1094 from Rhodosporidium toruloides IFO0880

mRNA_1094 9462 : HMMPfam-Frag1/DRAM/Sfk1 family-PF10277

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_3067 11435 HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197 no 0.74
2 mRNA_2191 10559 ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048 no 0.74
3 mRNA_8428 16796 KOG3808 Uncharacterized conserved protein no 0.73
4 mRNA_607 8975 K00140 mmsA, iolA, ALDH6A1 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase no 0.70
5 mRNA_3874 12242 KOG1535 Predicted fumarylacetoacetate hydralase no 0.70
6 mRNA_8078 16446 HMMPfam-ER membrane protein SH3-PF08229,SMART-ER membrane protein SH3-SM00786 no 0.66
7 mRNA_2752 11120 HMMPfam-F-box-like-PF12937 no 0.65
8 mRNA_4310 12678 Hypothetical Protein no 0.64
9 mRNA_3551 11919 K10276 FBXL10_11, KDM2 F-box and leucine-rich repeat protein 10/11 no 0.64
10 mRNA_5252 13620 BLAST LPS-assembly protein LptD [Rhizoctonia solani] no 0.63
11 mRNA_6837 15205 HMMPfam-DUF2407 ubiquitin-like domain-PF10302,HMMPfam-DUF2407 C-terminal domain-PF13373 no 0.63
12 mRNA_7243 15611 Hypothetical Protein no 0.63
13 mRNA_4305 12673 SUPERFAMILY--SSF69989 no 0.62
14 mRNA_1428 9796 HMMPfam-Protein of unknown function (DUF3237)-PF11578 no 0.62
15 mRNA_4031 12399 K08726 EPHX2 soluble epoxide hydrolase / lipid-phosphate phosphatase no 0.62
16 mRNA_708 9076 HMMPfam-Ferritin-like domain-PF13668 no 0.62
17 mRNA_4897 13265 K01759 GLO1, gloA lactoylglutathione lyase no 0.61
18 mRNA_5050 13418 Hypothetical Protein no 0.61
19 mRNA_221 8589 HMMPfam-Squalene/phytoene synthase-PF00494,ProSitePatterns-Squalene and phytoene synthases signature 2.-PS01045,SUPERFAMILY--SSF48576,TIGRFAM-CarR_dom_SF lycopene cyclase domain-TIGR03462 no 0.60
20 mRNA_2882 11250 Hypothetical Protein no 0.60