Top cofit genes for mRNA_1074 from Rhodosporidium toruloides IFO0880

mRNA_1074 9442 : HMMPfam-Ankyrin repeats (3 copies)-PF12796,ProSiteProfiles-Ankyrin repeat profile.-PS50088,ProSiteProfiles-Ankyrin repeat region circular profile.-PS50297,SUPERFAMILY--SSF48403

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_2732 11100 Hypothetical Protein no 0.69
2 mRNA_2053 10421 KOG2450 Aldehyde dehydrogenase no 0.68
3 mRNA_2659 11027 Hypothetical Protein no 0.66
4 mRNA_2143 10511 HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383 no 0.65
5 mRNA_2168 10536 Hypothetical Protein no 0.64
6 mRNA_20 8388 KOG0519 Sensory transduction histidine kinase no 0.63
7 mRNA_1360 9728 K01054 MGLL acylglycerol lipase no 0.63
8 mRNA_1675 10043 K01424 E3.5.1.1, ansA, ansB L-asparaginase no 0.63
9 mRNA_5001 13369 K00649 GNPAT glyceronephosphate O-acyltransferase no 0.63
10 mRNA_7333 15701 SUPERFAMILY--SSF52047 no 0.62
11 mRNA_7282 15650 HMMPfam-Amidohydrolase family-PF07969,HMMPfam-Amidohydrolase-PF13594,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556 no 0.61
12 mRNA_2442 10810 HMMPfam-ACT domain-PF13840,SUPERFAMILY--SSF55021 no 0.61
13 mRNA_3947 12315 KOG1502 Flavonol reductase/cinnamoyl-CoA reductase no 0.61
14 mRNA_798 9166 K15376 GPHN gephyrin no 0.61
15 mRNA_1048 9416 KOG1812 Predicted E3 ubiquitin ligase no 0.60
16 mRNA_4793 13161 HMMPfam-Peroxidase-PF00141,PRINTS-Haem peroxidase superfamily signature-PR00458,PRINTS-Plant ascorbate peroxidase signature-PR00459,ProSitePatterns-Peroxidases proximal heme-ligand signature.-PS00435,ProSitePatterns-Peroxidases active site signature.-PS00436,ProSiteProfiles-Plant heme peroxidase family profile.-PS50873,SUPERFAMILY--SSF48113 no 0.60
17 mRNA_3852 12220 HMMPfam-Glutathione S-transferase, C-terminal domain-PF00043,HMMPfam-Glutathione S-transferase, N-terminal domain-PF13417,ProSiteProfiles-Soluble glutathione S-transferase N-terminal domain profile.-PS50404,ProSiteProfiles-Soluble glutathione S-transferase C-terminal domain profile.-PS50405,SUPERFAMILY--SSF47616,SUPERFAMILY--SSF52833 no 0.60
18 mRNA_5565 13933 KOG3033 Predicted PhzC/PhzF-type epimerase no 0.60
19 mRNA_5637 14005 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.59
20 mRNA_902 9270 KOG2398 Predicted proline-serine-threonine phosphatase-interacting protein (PSTPIP) no 0.58