Top cofit genes for mRNA_1046 from Rhodosporidium toruloides IFO0880

mRNA_1046 9414 : K11346 ING4 inhibitor of growth protein 4

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5022 13390 Hypothetical Protein no 0.79
2 mRNA_4564 12932 K11844 USP16_45 ubiquitin carboxyl-terminal hydrolase 16/45 no 0.79
3 mRNA_1020 9388 K01527 EGD1, BTF3 nascent polypeptide-associated complex subunit beta no 0.77
4 mRNA_8155 16523 K15361 WDR48, UAF1 WD repeat-containing protein 48 no 0.77
5 mRNA_4568 12936 Hypothetical Protein no 0.76
6 mRNA_3414 11782 Hypothetical Protein no 0.75
7 mRNA_1514 9882 K07050 AARSD1, ALAX misacylated tRNA(Ala) deacylase no 0.73
8 mRNA_639 9007 K18027 PTPN3, PTPH1 tyrosine-protein phosphatase non-receptor type 3 no 0.72
9 mRNA_5609 13977 HMMPfam-Leucine Rich Repeat-PF00560,ProSiteProfiles-Leucine-rich repeat profile.-PS51450,SMART-Leucine-rich repeats, typical (most populated) subfamily-SM00369,SUPERFAMILY--SSF52058 no 0.69
10 mRNA_3124 11492 K04079 HSP90A, htpG molecular chaperone HtpG no 0.68
11 mRNA_1338 9706 SUPERFAMILY--SSF52047 no 0.68
12 mRNA_4783 13151 Hypothetical Protein no 0.68
13 mRNA_2082 10450 Hypothetical Protein no 0.68
14 mRNA_941 9309 HMMPfam-Calcineurin-like phosphoesterase-PF00149,SUPERFAMILY--SSF56300 no 0.67
15 mRNA_4806 13174 Hypothetical Protein no 0.67
16 mRNA_5290 13658 HMMPfam-ARID/BRIGHT DNA binding domain-PF01388,ProSiteProfiles-ARID domain profile.-PS51011,SMART-BRIGHT, ARID (A/T-rich interaction domain) domain-SM00501,SMART-ARID/BRIGHT DNA binding domain-SM01014,SUPERFAMILY--SSF46774 no 0.67
17 mRNA_6729 15097 HMMPfam-Putative GTPase activating protein for Arf-PF01412,PRINTS-HIV Rev interacting protein signature-PR00405,ProSiteProfiles-ARF GTPase-activating proteins domain profile.-PS50115,SMART-Putative GTP-ase activating proteins for the small GTPase, ARF-SM00105,SUPERFAMILY--SSF57863 no 0.67
18 mRNA_3703 12071 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.67
19 mRNA_4741 13109 KOG2208 Vigilin no 0.67
20 mRNA_3398 11766 Hypothetical Protein no 0.66