Top cofit genes for mRNA_856 from Rhodosporidium toruloides IFO0880

mRNA_856 9224 : KOG0828 Predicted E3 ubiquitin ligase

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_3220 11588 KOG0686 COP9 signalosome, subunit CSN1 no 0.77
2 mRNA_7716 16084 HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383 no 0.75
3 mRNA_4990 13358 K00354 E1.6.99.1 NADPH2 dehydrogenase no 0.71
4 mRNA_319 8687 KOG2134 Polynucleotide kinase 3' phosphatase no 0.71
5 mRNA_7894 16262 HMMPfam-Eisosome component PIL1-PF13805 no 0.70
6 mRNA_3537 11905 Hypothetical Protein no 0.70
7 mRNA_2982 11350 Hypothetical Protein no 0.70
8 mRNA_1265 9633 K14861 URB1 nucleolar pre-ribosomal-associated protein 1 no 0.69
9 mRNA_6212 14580 SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045 no 0.69
10 mRNA_7652 16020 HMMPfam-XPG I-region-PF00867,PRINTS-Xeroderma pigmentosum group G/yeast RAD superfamily signature-PR00853,SMART-Xeroderma pigmentosum G I-region-SM00484,SUPERFAMILY--SSF47807,SUPERFAMILY--SSF88723 no 0.68
11 mRNA_6443 14811 K10427 DCTN5 dynactin 5 no 0.68
12 mRNA_2114 10482 K10768 ALKBH6 alkylated DNA repair protein alkB homolog 6 no 0.68
13 mRNA_7548 15916 K08023 LTBP2_3_4 latent transforming growth factor beta binding protein 2/3/4 no 0.67
14 mRNA_2495 10863 K03507 DPB11 DNA replication regulator DPB11 no 0.67
15 mRNA_7131 15499 K17800 LETM1, MDM38 LETM1 and EF-hand domain-containing protein 1, mitochondrial no 0.67
16 mRNA_2898 11266 KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily no 0.66
17 mRNA_4066 12434 K03426 E3.6.1.22, NUDT12, nudC NAD+ diphosphatase no 0.66
18 mRNA_3269 11637 Hypothetical Protein no 0.65
19 mRNA_6004 14372 SUPERFAMILY--SSF52047 no 0.65
20 mRNA_8084 16452 K05351 E1.1.1.9 D-xylulose reductase no 0.65