Top cofit genes for mRNA_719 from Rhodosporidium toruloides IFO0880

mRNA_719 9087 : HMMPfam-Protein of unknown function (DUF3074)-PF11274

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_2940 11308 SUPERFAMILY--SSF56300 no 0.81
2 mRNA_2961 11329 ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.79
3 mRNA_366 8734 HMMPfam-Thioredoxin-like-PF13905,SUPERFAMILY--SSF52833 no 0.78
4 mRNA_7022 15390 KOG0758 Mitochondrial carnitine-acylcarnitine carrier protein no 0.78
5 mRNA_5475 13843 KOG0084 GTPase Rab1/YPT1, small G protein superfamily, and related GTP-binding proteins no 0.76
6 mRNA_7160 15528 HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928 no 0.75
7 mRNA_5356 13724 K07748 E1.1.1.170, NSDHL, ERG26 sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating) no 0.74
8 mRNA_4732 13100 HMMPfam-Major intrinsic protein-PF00230,PRINTS-Major intrinsic protein family signature-PR00783,SUPERFAMILY--SSF81338 no 0.73
9 mRNA_2716 11084 Hypothetical Protein no 0.73
10 mRNA_2989 11357 SUPERFAMILY--SSF103473 no 0.72
11 mRNA_7105 15473 KOG1890 Phosphoinositide phosphatase SAC1 no 0.72
12 mRNA_5516 13884 Hypothetical Protein no 0.72
13 mRNA_5566 13934 Hypothetical Protein no 0.71
14 mRNA_1174 9542 K15190 MEPCE, BCDIN3 7SK snRNA methylphosphate capping enzyme no 0.71
15 mRNA_3562 11930 KOG0017 FOG Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations no 0.71
16 mRNA_635 9003 KOG1470 Phosphatidylinositol transfer protein PDR16 and related proteins no 0.70
17 mRNA_860 9228 HMMPfam-PX domain-PF00787,HMMPfam-BAR domain-PF03114,ProSiteProfiles-PX domain profile.-PS50195,SMART-PhoX homologous domain, present in p47phox and p40phox.-SM00312,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF64268 no 0.70
18 mRNA_3883 12251 K01784 galE, GALE UDP-glucose 4-epimerase no 0.69
19 mRNA_7260 15628 K09230 SCAN SCAN domain-containing zinc finger protein no 0.69
20 mRNA_7624 15992 KOG1535 Predicted fumarylacetoacetate hydralase no 0.69