Top cofit genes for mRNA_609 from Rhodosporidium toruloides IFO0880

mRNA_609 8977 : K19001 HELLS, DDM1 ATP-dependent DNA helicase

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_2250 10618 HMMPfam-Apolipoprotein O-PF09769 no 0.84
2 mRNA_299 8667 ProSiteProfiles-SET domain profile.-PS50280,SUPERFAMILY--SSF82199 no 0.81
3 mRNA_5031 13399 HMMPfam-PAS fold-PF00989,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-PAS repeat profile.-PS50112,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF55785 no 0.80
4 mRNA_2010 10378 KOG2533 Permease of the major facilitator superfamily no 0.80
5 mRNA_1680 10048 BLAST cyclin-like F-box domain containing protein [Rhod... no 0.79
6 mRNA_2582 10950 HMMPfam-Ribosomal protein L35-PF01632,PRINTS-Ribosomal protein L35 signature-PR00064,ProSitePatterns-Ribosomal protein L35 signature.-PS00936,SUPERFAMILY--SSF143034 no 0.79
7 mRNA_8163 16531 HMMPfam-Domain of unknown function (DUF4505)-PF14956 no 0.79
8 mRNA_6437 14805 K07511 ECHS1 enoyl-CoA hydratase no 0.78
9 mRNA_4464 12832 Hypothetical Protein no 0.78
10 mRNA_4374 12742 K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase no 0.77
11 mRNA_305 8673 HMMPfam-Peroxisomal biogenesis factor 11 (PEX11)-PF05648 no 0.77
12 mRNA_5654 14022 K01637 E4.1.3.1, aceA isocitrate lyase no 0.75
13 mRNA_2053 10421 KOG2450 Aldehyde dehydrogenase no 0.75
14 mRNA_5624 13992 KOG1611 Predicted short chain-type dehydrogenase no 0.75
15 mRNA_4435 12803 KOG0154 RNA-binding protein RBM5 and related proteins, contain G-patch and RRM domains no 0.74
16 mRNA_5877 14245 K00624 E2.3.1.7 carnitine O-acetyltransferase no 0.74
17 mRNA_5838 14206 Hypothetical Protein no 0.74
18 mRNA_3904 12272 KOG1176 Acyl-CoA synthetase no 0.74
19 mRNA_2941 11309 BLAST IncA domain protein [Rhizoctonia solani AG-3 Rhs1AP] no 0.74
20 mRNA_7002 15370 Hypothetical Protein no 0.73